TAMU_GH_TBb098B05r411, TAMU_GH_TBb098B05r411 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb098B05r411
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i32743Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
Chr02chromosomeChr02:58870652..58870652 .Gossypium raimondii (D5) genome JGI_v2_a2.1
D01chromosomeD01:60180513..60180611 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1
A01chromosomeA01:99102657..99102757 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1
CM018215.1chromosomeCM018215.1:58837541..58837639 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1
CM018202.1chromosomeCM018202.1:108304602..108304701 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1
D5_01chromosomeD5_01:52691824..52691923 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1
D10_01chromosomeD10_01:3909676..3909775 -Gossypium turneri (D10) genome NSF_v1_a2
Dt_chr2chromosomeDt_chr2:49833774..49833874 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1
D01chromosomeD01:57429188..57429286 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1
A01chromosomeA01:95218770..95218870 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1
Ghir_D01chromosomeGhir_D01:59111083..59111181 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1
Ghir_A01chromosomeGhir_A01:112787509..112787609 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1
D01chromosomeD01:60686435..60686533 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1
A01chromosomeA01:113349962..113350062 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1
D01chromosomeD01:60523885..60523983 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1
A01chromosomeA01:111077194..111077294 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1
D01chromosomeD01:57761322..57761420 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1
A01chromosomeA01:107864513..107864613 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1
Gbar_D01chromosomeGbar_D01:59060120..59060218 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1
Gbar_A01chromosomeGbar_A01:110782370..110782469 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1
D01chromosomeD01:59718247..59718345 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1
A01chromosomeA01:110748307..110748406 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1
CM017623.1chromosomeCM017623.1:59932779..59932877 +Gossypium tomentosum (AD3) genome HGS_v1.1
CM017610.1chromosomeCM017610.1:109366456..109366555 +Gossypium tomentosum (AD3) genome HGS_v1.1
CM017649.1chromosomeCM017649.1:61428609..61428707 +Gossypium mustelinum (AD4) genome JGI_v1.1
CM017636.1chromosomeCM017636.1:116775222..116775321 +Gossypium mustelinum (AD4) genome JGI_v1.1
CM017701.1chromosomeCM017701.1:59405006..59405104 +Gossypium darwinii (AD5) genome HGS_v1.1
CM017688.1chromosomeCM017688.1:106885789..106885888 +Gossypium darwinii (AD5) genome HGS_v1.1
D01chromosomeD01:61011483..61011581 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1
A01chromosomeA01:114681883..114681983 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1
Chr01chromosomeChr01:118036928..118037027 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1
Chr01chromosomeChr01:48500661..48500760 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1
Chr02chromosomeChr02:58062714..58062813 +Gossypium davidsonii (D3d-8) genome CRI_v1
Chr02chromosomeChr02:33404443..33404541 +Gossypium gossypioides (D6) genome ISU_v1
E01chromosomeE01:111398316..111398415 +Gossypium stocksii (E1) genome NSF_v1
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
10-153 x sGK9708, RIL (2017)AD_ch01_At.01N/A34.14i32743GhView
Sequence
>TAMU_GH_TBb098B05r411 ID=TAMU_GH_TBb098B05r411; Name=TAMU_GH_TBb098B05r411; organism=Gossypium sp.; type=genetic_marker; length=105bp
ATCCATTTTTTTGCTGTGGCTTACTGTAAAAAGTAGGCAAAGAAAGAAAC
[A/G]AGTGTAGCTCCAACCAAGGACTCAATAACAGGCATTGTTGAGATT
GCGAC