TAMU_GH_TBb072K04f574, TAMU_GH_TBb072K04f574 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb072K04f574
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i30195Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A08chromosomeA08:9955035..9955135 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018209.1chromosomeCM018209.1:9638863..9638963 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr08_CRI-A2_v1.0.a1chromosomeChr08_CRI-A2_v1.0.a1:11076996..11077096 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr4chromosomeAt_chr4:87572384..87572484 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:9531698..9531798 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:9934522..9934622 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:9728506..9728606 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:10065406..10065506 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:9864026..9864126 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:10020486..10020586 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:9740516..9740616 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:10016193..10016293 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:10377574..10377674 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017695.1chromosomeCM017695.1:9840432..9840532 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A08chromosomeA08:10464224..10464324 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:11226330..11226430 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Phytogen 72 x Stoneville 474, consbin (2017)AD_ch08_At.08N/A76.62SNPi30195GhView
2HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch08_At.08N/A35.18i30195GhView
3HS-46 x MARCABUCAG8US-1-88, RIL (2018)AD_ch08_At.08N/A35.18i30195GhView
4Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch08_At.08N/A84.9i30195GhView
Sequence
>TAMU_GH_TBb072K04f574 ID=TAMU_GH_TBb072K04f574; Name=TAMU_GH_TBb072K04f574; organism=Gossypium sp.; type=genetic_marker; length=101bp
CATACGAAGCTCTATATGGTCATAGGTGTTGTACCCCTACTTGCTGGACT
RAACAGGGTGAGCGTCGAATTCTGGGGCYGGAGTTAATTGCTGATACAGA
A