TAMU_GH_TBb018C20r200, TAMU_GH_TBb018C20r200 (genetic_marker) Gossypium sp.

Marker Overview
NameTAMU_GH_TBb018C20r200
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i24786Gh
TypeSNP
SNP AllelesT/C
SpeciesGossypium sp.
Publication[view all]
ContactStelly, David M.
Commentsequence data obtained from TAMU CottonSNP63K Array
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A04chromosomeA04:12194231..12194331 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018205.1chromosomeCM018205.1:12137185..12137285 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
At_chr12chromosomeAt_chr12:26672750..26672850 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A04chromosomeA04:11895698..11895798 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
scaffold15967supercontigscaffold15967:758..858 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A04chromosomeA04:12512121..12512221 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A04chromosomeA04:11874584..11874684 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A04chromosomeA04:11632916..11633016 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A04chromosomeGbar_A04:12178191..12178291 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A04chromosomeA04:11825530..11825630 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017613.1chromosomeCM017613.1:12783892..12783992 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017639.1chromosomeCM017639.1:13840816..13840916 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017691.1chromosomeCM017691.1:11926086..11926186 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A04chromosomeA04:13364185..13364285 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:79447919..79448019 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1HS-46 x MARCABUCAG8US-1-88, RIL (2016)AD_ch04_At.04N/A11.76i24786GhView
2Phytogen 72 x Stoneville 474, consbin (2017)AD_ch04_At.04N/A61.94i24786GhView
3Phytogen 72 x Stoneville 474, F2 (2015 SNP)AD_ch04_At.04N/A38.6i24786GhView
Sequence
>TAMU_GH_TBb018C20r200 ID=TAMU_GH_TBb018C20r200; Name=TAMU_GH_TBb018C20r200; organism=Gossypium sp.; type=genetic_marker; length=105bp
AATTTCAAAGTCCCTTCTCAAATTCAGTAGTTGTTGTTGCCTTATTCTTT
[C/T]AGTTCCTTGAAACTCCTCATTTAGTCTGTCCAATGCTTGCTTTGG
TGACT