NAU_TM44129, NAU_TM44129 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM44129
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM44129
TypeSNP
SNP AllelesG/A
5' Flanking SequenceTTCTTTTGTAGGTGTTTGAGGTGGTCAACGACGTTAGGGAGCCATGCCTTTTCCATTTCG
3' Flanking SequenceTGAAAGGGGGCAGACGAGGCATCGGACCTTGGGCGACGCGTTTGCTAACGTGGTGGAGGC
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018214.1chromosomeCM018214.1:51517762..51517882 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:59391719..59391839 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr13chromosomeAt_chr13:2207751..2207871 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A13chromosomeA13:32082750..32082870 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A13chromosomeGhir_A13:50922573..50922693 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A13chromosomeA13:53349626..53349746 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A13chromosomeA13:51549663..51549783 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A13chromosomeA13:50315585..50315705 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A13chromosomeGbar_A13:51249766..51249886 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A13chromosomeA13:54325772..54325892 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017622.1chromosomeCM017622.1:53196565..53196685 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017648.1chromosomeCM017648.1:56056549..56056668 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017700.1chromosomeCM017700.1:52649853..52649973 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A13chromosomeA13:53238415..53238535 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:63511224..63511344 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch13_At.13N/A34.7TM44129View
Sequence
>NAU_TM44129 ID=NAU_TM44129; Name=NAU_TM44129; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTCTTTTGTAGGTGTTTGAGGTGGTCAACGACGTTAGGGAGCCATGCCTT
TTCCATTTCG[A/G]TGAAAGGGGGCAGACGAGGCATCGGACCTTGGGCG
ACGCGTTTGCTAACGTGGTGGAGGC