NAU_TM43304, NAU_TM43304 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM43304
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM43304
TypeSNP
SNP AllelesG/T
5' Flanking SequenceACCTGCAATAACCAAATTCTAATTCAGCGGAATAATATTAAAAAAAGCTTGTAAAAGTCA
3' Flanking SequenceGAACTTTCAAAGCTTCTAGATTTACAATTGATTCCAAGATTATAGATTTGATAACAAGTA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018214.1chromosomeCM018214.1:3008071..3008191 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:3150227..3150347 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr7chromosomeDt_chr7:36835920..36836040 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A13chromosomeA13:3099433..3099553 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A13chromosomeGhir_A13:2984268..2984388 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A13chromosomeA13:3094847..3094967 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A13chromosomeA13:2881181..2881301 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A13chromosomeA13:2964964..2965084 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A13chromosomeGbar_A13:3055965..3056085 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A13chromosomeA13:2975182..2975302 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017622.1chromosomeCM017622.1:3142781..3142901 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017648.1chromosomeCM017648.1:3103156..3103276 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017700.1chromosomeCM017700.1:2794523..2794643 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A13chromosomeA13:3224579..3224699 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:3083609..3083729 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr13chromosomeChr13:2982472..2982592 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_13chromosomeB_13:92032009..92032130 -Gossypium anomalum (B1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch13_At.13N/A2.8TM43304View
Sequence
>NAU_TM43304 ID=NAU_TM43304; Name=NAU_TM43304; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACCTGCAATAACCAAATTCTAATTCAGCGGAATAATATTAAAAAAAGCTT
GTAAAAGTCA[G/T]GAACTTTCAAAGCTTCTAGATTTACAATTGATTCC
AAGATTATAGATTTGATAACAAGTA