NAU_TM36586, NAU_TM36586 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM36586
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM36586
TypeSNP
SNP AllelesC/A
5' Flanking SequenceAAGCATACAATGGATGGATTAAATGAGGGGATTCTAGAAGATTCACATCCATGCATGTAA
3' Flanking SequenceAGTGACCACAACCAAGGCCATTCAATTGCCACCGTCCAAGAAGAAAGCTGAACATGACTT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018211.1chromosomeCM018211.1:104211974..104212094 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:8097770..8097890 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr11chromosomeAt_chr11:90072638..90072758 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:95354284..95354404 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:109363954..109364074 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:109933253..109933373 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:109472238..109472358 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:104506663..104506783 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:104516380..104516500 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:105979924..105980044 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017619.1chromosomeCM017619.1:105331435..105331555 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:113076478..113076598 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:107627723..107627843 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:112621706..112621826 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:121470065..121470185 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr10chromosomeChr10:116212888..116213008 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch10_At.10N/A136.2TM36586View
Sequence
>NAU_TM36586 ID=NAU_TM36586; Name=NAU_TM36586; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AAGCATACAATGGATGGATTAAATGAGGGGATTCTAGAAGATTCACATCC
ATGCATGTAA[A/C]AGTGACCACAACCAAGGCCATTCAATTGCCACCGT
CCAAGAAGAAAGCTGAACATGACTT