NAU_TM36460, NAU_TM36460 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM36460
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM36460
TypeSNP
SNP AllelesC/T
5' Flanking SequenceAACAAGGGCTTCAGCCATTAGATTCATTCACCTAATGCGCTGATTAAACCAAGCAAATCC
3' Flanking SequenceAATGGAACAGTATACCTCTCACAGCCTCAAAAAACAAAGACAGGGATAACCCAGACCTCA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018211.1chromosomeCM018211.1:102111511..102111631 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:10344423..10344543 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold1080.1supercontigscaffold1080.1:448898..449018 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:93513509..93513629 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:107312039..107312159 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:108045125..108045245 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:107433318..107433438 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:102412260..102412380 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:102434521..102434641 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:103946140..103946260 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017645.1chromosomeCM017645.1:111047052..111047172 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:105512167..105512287 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:110563682..110563802 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:114117261..114117381 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_10chromosomeB_10:9872235..9872355 -Gossypium anomalum (B1) genome NSF_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch10_At.10N/A119.9TM36460View
Sequence
>NAU_TM36460 ID=NAU_TM36460; Name=NAU_TM36460; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AACAAGGGCTTCAGCCATTAGATTCATTCACCTAATGCGCTGATTAAACC
AAGCAAATCC[C/T]AATGGAACAGTATACCTCTCACAGCCTCAAAAAAC
AAAGACAGGGATAACCCAGACCTCA