NAU_TM34881, NAU_TM34881 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM34881
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM34881
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTGAATATTGGATATTGACTATGTAAGAAGAATTAAATCAATTTGAGAGAAGTAAAGTATG
3' Flanking SequenceAGCCTAGTTGAAAGACCTAGTGAAAAATCTACTATAGGTATTAAGTGGCATTTTATGAAT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018211.1chromosomeCM018211.1:65997075..65997195 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:84314066..84314186 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr11chromosomeDt_chr11:44268944..44269064 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A10chromosomeA10:58277843..58277963 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A10chromosomeGhir_A10:69802277..69802397 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A10chromosomeA10:71361928..71362048 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A10chromosomeA10:69564336..69564456 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A10chromosomeA10:65216328..65216448 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A10chromosomeGbar_A10:66392659..66392779 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A10chromosomeA10:67873350..67873470 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017619.1chromosomeCM017619.1:67108904..67109024 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017645.1chromosomeCM017645.1:72746153..72746273 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017697.1chromosomeCM017697.1:68874610..68874730 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A10chromosomeA10:72627503..72627623 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:35256074..35256194 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr10chromosomeChr10:43687044..43687164 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch10_At.10N/A58.9TM34881View
Sequence
>NAU_TM34881 ID=NAU_TM34881; Name=NAU_TM34881; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TGAATATTGGATATTGACTATGTAAGAAGAATTAAATCAATTTGAGAGAA
GTAAAGTATG[A/G]AGCCTAGTTGAAAGACCTAGTGAAAAATCTACTAT
AGGTATTAAGTGGCATTTTATGAAT