NAU_TM33098, NAU_TM33098 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM33098
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM33098
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTCACTGAGTTCATCAACTTGATCTCTATTGCAAGGGACAAGAAGATTGTATCCATTTCCT
3' Flanking SequenceAATGCATGCTGAAATGGATGAAGATGTCCCTTTTGTCGTTCCTCCTAGATATGGCCCTAG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018210.1chromosomeCM018210.1:62527075..62527195 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr09_CRI-A2_v1.0.a1chromosomeChr09_CRI-A2_v1.0.a1:69251712..69251832 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr6chromosomeAt_chr6:49886869..49886989 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A09chromosomeA09:61962085..61962205 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A09chromosomeGhir_A09:66660696..66660816 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A09chromosomeA09:68478862..68478982 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A09chromosomeA09:68414983..68415103 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A09chromosomeA09:65309675..65309795 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A09chromosomeGbar_A09:62978854..62978974 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A09chromosomeA09:64425540..64425660 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017618.1chromosomeCM017618.1:64177544..64177663 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017644.1chromosomeCM017644.1:67130373..67130493 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017696.1chromosomeCM017696.1:64355584..64355704 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A09chromosomeA09:69733719..69733839 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:68473828..68473948 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr09chromosomeChr09:71727372..71727492 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch09_At.09N/A99.2TM33098View
Sequence
>NAU_TM33098 ID=NAU_TM33098; Name=NAU_TM33098; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TCACTGAGTTCATCAACTTGATCTCTATTGCAAGGGACAAGAAGATTGTA
TCCATTTCCT[C/T]AATGCATGCTGAAATGGATGAAGATGTCCCTTTTG
TCGTTCCTCCTAGATATGGCCCTAG