NAU_TM26827, NAU_TM26827 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM26827
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM26827
TypeSNP
SNP AllelesC/T
5' Flanking SequenceAGACTCTGCAGTGAGATCTGAAGCTAGAGCGCCTGCCAGAGCTTACGCTATTCGTGCTCG
3' Flanking SequenceGAAGAAGCGTCGTCTCCAAATGTGATCACTGGTACATTTTCTCTTTACGACACTAATATG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018209.1chromosomeCM018209.1:82569041..82569161 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
tig00019003_CRI-A2_v1.0.a1chromosometig00019003_CRI-A2_v1.0.a1:77480..77600 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr4chromosomeAt_chr4:67352724..67352844 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A08chromosomeA08:57292646..57292766 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A08chromosomeGhir_A08:85693766..85693886 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A08chromosomeA08:89303416..89303536 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A08chromosomeA08:88761320..88761440 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A08chromosomeA08:86066420..86066540 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A08chromosomeGbar_A08:83320558..83320678 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A08chromosomeA08:84376836..84376956 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017617.1chromosomeCM017617.1:83381546..83381666 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017643.1chromosomeCM017643.1:92527583..92527703 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
A08chromosomeA08:90221876..90221996 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr08chromosomeChr08:94060384..94060504 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr08chromosomeChr08:94426016..94426136 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch08_At.08N/A41.6TM26827View
Sequence
>NAU_TM26827 ID=NAU_TM26827; Name=NAU_TM26827; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGACTCTGCAGTGAGATCTGAAGCTAGAGCGCCTGCCAGAGCTTACGCTA
TTCGTGCTCG[C/T]GAAGAAGCGTCGTCTCCAAATGTGATCACTGGTAC
ATTTTCTCTTTACGACACTAATATG