NAU_TM21347, NAU_TM21347 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM21347
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM21347
TypeSNP
SNP AllelesA/G
5' Flanking SequenceACAAGTTTTACTAGCCCAATTAACTACACTAACCAAGGAGCATTATAATGTTATACAGAG
3' Flanking SequenceCACCGTAGTGCAAACGTAGGCACAATTGTGCAATCAGAGGCTTCAAAGTGCAAATAGAGA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018208.1chromosomeCM018208.1:88160309..88160430 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:91540476..91540597 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr7chromosomeAt_chr7:29725752..29725872 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:72633166..72633286 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:91959654..91959774 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:90989082..90989202 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:90945731..90945851 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:87432013..87432133 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:87246750..87246871 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:89478089..89478210 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:91090670..91090791 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:94035084..94035205 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:89444451..89444572 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:93018694..93018814 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:94815697..94815818 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:96228254..96228375 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch07_At.07N/A124.5TM21347View
Sequence
>NAU_TM21347 ID=NAU_TM21347; Name=NAU_TM21347; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACAAGTTTTACTAGCCCAATTAACTACACTAACCAAGGAGCATTATAATG
TTATACAGAG[A/G]CACCGTAGTGCAAACGTAGGCACAATTGTGCAATC
AGAGGCTTCAAAGTGCAAATAGAGA