NAU_TM19064, NAU_TM19064 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM19064
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM19064
TypeSNP
SNP AllelesC/T
5' Flanking SequenceCTTGATCGGCTTGAGATCTCATTATCCATGTAAAGTGTGCCACTTCTTGACTGAGCAACA
3' Flanking SequenceTCCGTACAATGTAACTGGGTTTGAGAATCTAGATGAATTCAAGGAACTCGATGAATCTGA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018208.1chromosomeCM018208.1:13019851..13019971 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:13337437..13337557 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
scaffold1842.1supercontigscaffold1842.1:196126..196246 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:11850947..11851067 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:12923440..12923560 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:12292431..12292551 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:12873391..12873511 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:12812407..12812527 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A07chromosomeGbar_A07:13095889..13096009 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:12863152..12863272 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:12737431..12737551 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:13045191..13045311 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:12981339..12981459 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:13020151..13020271 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:13440028..13440148 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:13507899..13508019 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch07_At.07N/A19.22TM19064View
Sequence
>NAU_TM19064 ID=NAU_TM19064; Name=NAU_TM19064; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
CTTGATCGGCTTGAGATCTCATTATCCATGTAAAGTGTGCCACTTCTTGA
CTGAGCAACA[C/T]TCCGTACAATGTAACTGGGTTTGAGAATCTAGATG
AATTCAAGGAACTCGATGAATCTGA