NAU_TM18322, NAU_TM18322 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM18322
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM18322
TypeSNP
SNP AllelesA/T
5' Flanking SequenceACTCTGGCACACTTTAATAGTGTAACTCAAAACTCCAGTGTAGATTGTTATTTCTACGGT
3' Flanking SequenceACTGCTGCTGCGACTACGGGATCACGATGTTACTTCTTAGGAAATGGAATAACATCCTCT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018207.1chromosomeCM018207.1:110597335..110597455 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr06_CRI-A2_v1.0.a1chromosomeChr06_CRI-A2_v1.0.a1:127457068..127457188 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A06chromosomeA06:100194979..100195099 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A06chromosomeGhir_A06:117980587..117980707 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A06chromosomeA06:120721424..120721544 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:119990737..119990857 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:115853568..115853688 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A06chromosomeGbar_A06:109616510..109616630 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A06chromosomeA06:112692878..112692998 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017615.1chromosomeCM017615.1:115590164..115590284 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:121070538..121070658 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017693.1chromosomeCM017693.1:113901369..113901489 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A06chromosomeA06:122151969..122152089 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:121764704..121764824 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:123444518..123444638 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch06_At.06N/A105.5TM18322View
2LMY28 x XLZ24, RIL (2018)AD_ch06_At.06N/A58.41TM18322View
Sequence
>NAU_TM18322 ID=NAU_TM18322; Name=NAU_TM18322; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACTCTGGCACACTTTAATAGTGTAACTCAAAACTCCAGTGTAGATTGTTA
TTTCTACGGT[A/T]ACTGCTGCTGCGACTACGGGATCACGATGTTACTT
CTTAGGAAATGGAATAACATCCTCT