NAU_TM18184, NAU_TM18184 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM18184
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM18184
TypeSNP
SNP AllelesC/T
5' Flanking SequenceATTGTGGTGAGATACATTGGTGTGCCAATGGTGACAAATGTATGATATATAAAATGAATT
3' Flanking SequenceATGGTCATGTTTGAGTATGTTTTGAAGTTGGCTTTCACATTTCAAATGTGTATTTGATAG
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018207.1chromosomeCM018207.1:109612530..109612650 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr06_CRI-A2_v1.0.a1chromosomeChr06_CRI-A2_v1.0.a1:123239810..123239930 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr10chromosomeAt_chr10:32127482..32127602 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A06chromosomeA06:97477113..97477233 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A06chromosomeGhir_A06:117039077..117039197 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A06chromosomeA06:119814198..119814318 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:119048203..119048323 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:114910781..114910901 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A06chromosomeGbar_A06:108642405..108642525 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A06chromosomeA06:111751856..111751976 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017615.1chromosomeCM017615.1:114717267..114717387 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:120028445..120028565 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017693.1chromosomeCM017693.1:112944415..112944535 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A06chromosomeA06:121203690..121203810 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:120747092..120747212 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:122385281..122385401 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch06_At.06N/A51.71TM18184View
Sequence
>NAU_TM18184 ID=NAU_TM18184; Name=NAU_TM18184; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ATTGTGGTGAGATACATTGGTGTGCCAATGGTGACAAATGTATGATATAT
AAAATGAATT[C/T]ATGGTCATGTTTGAGTATGTTTTGAAGTTGGCTTT
CACATTTCAAATGTGTATTTGATAG