NAU_TM10812, NAU_TM10812 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM10812
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM10812
TypeSNP
SNP AllelesC/A
5' Flanking SequenceACTGATCAGTGAAAGAAAGGAAGCCATTATTGCCTTTTGCTTTTGCTTCTCAAAGCTTTT
3' Flanking SequenceATGTTTTATAGGGCATACAGAAAAGTCTTCTCCCTTTTAATCACCATGTTTTCATTGTTT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018206.1chromosomeCM018206.1:18718960..18719080 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:18965687..18965807 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
CM016626.1chromosomeCM016626.1:28409542..28409662 +Gossypium australe (G2) genome CRI_v1.1n/a
At_chr9chromosomeAt_chr9:90504030..90504150 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A05chromosomeA05:17485628..17485748 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:19103067..19103187 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:18515365..18515485 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:19115609..19115729 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:19276822..19276942 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:18306381..18306501 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:19019355..19019475 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:18751978..18752098 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:19160191..19160311 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:18547532..18547652 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:19407536..19407656 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:20180536..20180656 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:18887818..18887938 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_05chromosomeB_05:67554093..67554213 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr09chromosomeChr09:12227672..12227792 +Gossypium gossypioides (D6) genome ISU_v1n/a
F05chromosomeF05:16173558..16173678 +Gossypium longicalyx (F1) genome NSF_v1n/a
Chr13chromosomeChr13:172980335..172980455 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch05_At.05N/A57.2TM10812View
Sequence
>NAU_TM10812 ID=NAU_TM10812; Name=NAU_TM10812; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ACTGATCAGTGAAAGAAAGGAAGCCATTATTGCCTTTTGCTTTTGCTTCT
CAAAGCTTTT[A/C]ATGTTTTATAGGGCATACAGAAAAGTCTTCTCCCT
TTTAATCACCATGTTTTCATTGTTT