NAU_TM04759, NAU_TM04759 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM04759
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM04759
TypeSNP
SNP AllelesC/A
5' Flanking SequenceTTTCTACGTGATTAAATCAAAATTAGAGAAGTTTGAAGGGAAGTGTGCAGTAAGAGACGA
3' Flanking SequenceAATTACTCATGGAAAATCATGGCTTCTATTAGGAAGAAGACAGGGTTATAGACGATTAAA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018203.1chromosomeCM018203.1:43571381..43571501 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:82646453..82646573 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr3chromosomeAt_chr3:17027421..17027541 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A02chromosomeA02:42540453..42540573 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A02chromosomeGhir_A02:46347545..46347665 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A02chromosomeA02:44545595..44545715 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A02chromosomeA02:44912373..44912493 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A02chromosomeA02:44361657..44361777 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A02chromosomeGbar_A02:44110920..44111040 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A02chromosomeA02:44541612..44541732 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017611.1chromosomeCM017611.1:43851921..43852040 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017637.1chromosomeCM017637.1:46958156..46958276 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017689.1chromosomeCM017689.1:44324952..44325072 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A02chromosomeA02:45806037..45806157 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:29239883..29240003 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:88712801..88712921 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch02_At.02N/A58.1TM4759View
Sequence
>NAU_TM04759 ID=NAU_TM04759; Name=NAU_TM04759; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
TTTCTACGTGATTAAATCAAAATTAGAGAAGTTTGAAGGGAAGTGTGCAG
TAAGAGACGA[A/C]AATTACTCATGGAAAATCATGGCTTCTATTAGGAA
GAAGACAGGGTTATAGACGATTAAA