NAU_TM04185, NAU_TM04185 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM04185
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM04185
TypeSNP
SNP AllelesC/G
5' Flanking SequenceATCATTTGTTCAGATAAGGAAGAATATGTTTTGGTTAACCATTTATTTTCCAAAGAATTC
3' Flanking SequenceTTTTTCTTATAAGGTGGTCGTTTCTTGGTAATGCAACCTTAGATTGCCTTTGATCGATGA
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018203.1chromosomeCM018203.1:8655090..8655210 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr03_CRI-A2_v1.0.a1chromosomeChr03_CRI-A2_v1.0.a1:9786905..9787025 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr3chromosomeAt_chr3:39478476..39478596 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A02chromosomeA02:8941853..8941973 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A02chromosomeGhir_A02:8903446..8903566 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A02chromosomeA02:8587578..8587698 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A02chromosomeA02:9166877..9166997 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A02chromosomeA02:9145804..9145924 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A02chromosomeGbar_A02:8761218..8761338 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A02chromosomeA02:8679172..8679292 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017611.1chromosomeCM017611.1:8747035..8747154 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017637.1chromosomeCM017637.1:9115034..9115154 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017689.1chromosomeCM017689.1:8825811..8825931 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A02chromosomeA02:9234320..9234440 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:122171988..122172108 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr03chromosomeChr03:120998900..120999020 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x Acala Maxxa, RIL (2018)AD_ch02_At.02N/A47.9TM4185View
Sequence
>NAU_TM04185 ID=NAU_TM04185; Name=NAU_TM04185; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
ATCATTTGTTCAGATAAGGAAGAATATGTTTTGGTTAACCATTTATTTTC
CAAAGAATTC[C/G]TTTTTCTTATAAGGTGGTCGTTTCTTGGTAATGCA
ACCTTAGATTGCCTTTGATCGATGA