NAU_TM03845, NAU_TM03845 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_TM03845
dbSNP IDN/A
SNP Array ID
NAU_CottonSNP80K:NAU_TM03845
TypeSNP
SNP AllelesC/T
5' Flanking SequenceAGCCAACTTTATCCATTTAAAGGCCTCCAAAATTATACCTCTGGAATTATTCACCATGTT
3' Flanking SequenceGCCTCACTGGTATTTCTCACCATCTCTTCTCTTATTTATCTTCTGCTAATTTGTTTTCTT
SpeciesGossypium hirsutum
Publication[view all]
ContactGuo, Wang-Zhen
Contact
NameDetails
Guo, Wang-Zhen
First name:Wang-Zhen
Last name:Guo
Institution:Nanjing Agri Univ
Address:Weigang No.1, Nanjing, Jiangsu Prov 210095
Country:China
Email:moelab@njau.edu.cn
Phone:+086 25 84395311
Fax:+086 25 84395307
Keywords:Cotton Genomics
Last update:20-Sep-2011
Libraries
Library NameType
NAU_CottonSNP80KSNP_chip
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM018216.1chromosomeCM018216.1:3206286..3206406 +
CM018203.1chromosomeCM018203.1:2644506..2644625 +
D5_03chromosomeD5_03:60620542..60620661 -
Chr03_CRI-A2_v1.0.a1chromosomeChr03_CRI-A2_v1.0.a1:2910620..2910740 +
CM016616.1chromosomeCM016616.1:149287310..149287430 -
At_chr8chromosomeAt_chr8:73558611..73558731 +
scaffold783.1supercontigscaffold783.1:739923..740043 -
D02chromosomeD02:3617644..3617764 +
A02chromosomeA02:2496406..2496526 +
Ghir_D02chromosomeGhir_D02:3568882..3569002 +
Ghir_A02chromosomeGhir_A02:2645219..2645339 +
D02chromosomeD02:3387767..3387887 +
A02chromosomeA02:2561276..2561396 +
D02chromosomeD02:3564582..3564702 +
A02chromosomeA02:2766090..2766210 +
D02chromosomeD02:3511099..3511219 +
A02chromosomeA02:2664124..2664244 +
Gbar_D02chromosomeGbar_D02:3651110..3651230 +
Gbar_A02chromosomeGbar_A02:2571765..2571884 +
A02chromosomeA02:2596606..2596725 +
CM017624.1chromosomeCM017624.1:4584638..4584758 +
CM017624.1chromosomeCM017624.1:3129134..3129254 +
CM017611.1chromosomeCM017611.1:2637443..2637563 +
CM017637.1chromosomeCM017637.1:2752170..2752290 +
CM017702.1chromosomeCM017702.1:3642838..3642958 +
CM017702.1chromosomeCM017702.1:3227677..3227797 +
CM017689.1chromosomeCM017689.1:2668990..2669109 +
D02chromosomeD02:3666372..3666492 +
A02chromosomeA02:2778597..2778717 +
Chr03chromosomeChr03:129140920..129141040 -
Chr03chromosomeChr03:127944861..127944981 -
Chr03chromosomeChr03:2906242..2906362 +
B_03chromosomeB_03:104299224..104299344 -
Chr05chromosomeChr05:3342714..3342834 +
Chr05chromosomeChr05:3610901..3611021 +
Chr05chromosomeChr05:2983070..2983190 +
E03chromosomeE03:4227867..4227987 +
F03chromosomeF03:2653076..2653196 +
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1LMY28 x XLZ24, RIL (2018)AD_ch02_At.02N/A20.16TM3845View
Sequence
>NAU_TM03845 ID=NAU_TM03845; Name=NAU_TM03845; organism=Gossypium hirsutum; type=genetic_marker; length=125bp
AGCCAACTTTATCCATTTAAAGGCCTCCAAAATTATACCTCTGGAATTAT
TCACCATGTT[C/T]GCCTCACTGGTATTTCTCACCATCTCTTCTCTTAT
TTATCTTCTGCTAATTTGTTTTCTT