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Marker Overview
| Name | TAMU_Gl_000106 |
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| Alias | Gl_000106_Class_III
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | TCCACTGCTATTGATACATTTCTAGGATAACATTACCTCCACTCCCTTTA |
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| 3' Flanking Sequence | GGTATACTTCGAGGCAGCAAGAAAAACTAAGAGTTATCACTCGATGAAGA |
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| Species | Gossypium longicalyx |
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| Germplasm | BLC_200908137.04 |
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| Source Type | RNA |
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| Publication | [view all] |
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| Contact | Stelly, David M.
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| Comment | class_III: a SNP in which additional polymorphisms were found in the same contig and within 50 bp of the marker |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2014 | Hulse-Kemp AM, Ashrafi H, Zheng X, Wang F, Hoegenauer KA, Maeda AB, Yang SS, Stoffel K, Matvienko M, Clemons K, Udall JA, Van Deynze A, Jones DC, Stelly DM. Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts. BMC genomics. 2014 Oct 30; 15(1):945. |
Sequence
>TAMU_Gl_000106 ID=TAMU_Gl_000106; Name=TAMU_Gl_000106; organism=Gossypium longicalyx; type=genetic_marker; length=105bp
TCCACTGCTATTGATACATTTCTAGGATAACATTACCTCCACTCCCTTTA
[C/T]GGTATACTTCGAGGCAGCAAGAAAAACTAAGAGTTATCACTCGAT
GAAGA
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