g.arboreum_cottongen_reftransV1_0021259, g.arboreum_cottongen_reftransV1_0021259 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0B0NU41_GOSAR (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Gossypium arboreum GN=F383_17786 PE=4 SV=1) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK Sbjct: 295 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 625 HSP 2 Score: 198.749 bits (504), Expect = 1.143e-50 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 1752 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE Sbjct: 642 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 741
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2RVB0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 192.971 bits (489), Expect = 1.072e-48 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 1752 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+KAQE Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVKAQE 740
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2MV98_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 187.193 bits (474), Expect = 8.454e-47 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2QTX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 126.716 bits (317), Expect = 6.368e-27 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKME 1647 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKME Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKME 705
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2R0U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 186.808 bits (473), Expect = 9.283e-47 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2P8L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 282/289 (97.58%), Postives = 282/289 (97.58%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQ 869 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQ Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQ 582
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A061DPH8_THECC (Methylcrotonyl-CoA carboxylase alpha chai isoform 2 OS=Theobroma cacao GN=TCM_004300 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 285/334 (85.33%), Postives = 302/334 (90.42%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSM 1004 AVSAAKAVGYHNAGTVEFIVDT TG FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQ QVPLSGH+FEARIYAENVPKGFLPATGVL HYHPVP SSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENR+AALVKLKDCL KFQVAG+PTNINFLQKLANH+AFEEG+VETHFIEHH DDLFVDPNNK I E+AY AARL A LVAACLCE+E S +KESH G PSLL IWYAH PFRVNHHAQ TME EWEN Y+SSSSKPLML+ITY DGNY IQH QIGEN H LEV+AS+LGN++F VE+DG+TM+VSLAVY K M Sbjct: 147 AVSAAKAVGYHNAGTVEFIVDTITGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQVQVPLSGHSFEARIYAENVPKGFLPATGVLRHYHPVPVSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRSAALVKLKDCLSKFQVAGVPTNINFLQKLANHRAFEEGDVETHFIEHHKDDLFVDPNNKEISEEAYDAARLSANLVAACLCEEEHSTLKESHPGGPSLLSIWYAHSPFRVNHHAQSTMELEWENGYDSSSSKPLMLAITYQRDGNYLIQHIQIGENSAHSLEVRASHLGNNSFRVEADGVTMHVSLAVYIKDKM 480 HSP 2 Score: 179.104 bits (453), Expect = 1.151e-44 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGL+LSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVE GQ VLVLEAMKMEHVVKATSGG V+GLKV AGQQVSDGSVLFR+K Sbjct: 494 FRQKLGLELSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEEGQPVLVLEAMKMEHVVKATSGGYVQGLKVTAGQQVSDGSVLFRVK 590
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A061DXH9_THECC (Methylcrotonyl-CoA carboxylase alpha chai isoform 1 OS=Theobroma cacao GN=TCM_004300 PE=4 SV=1) HSP 1 Score: 587.415 bits (1513), Expect = 0.000e+0 Identity = 283/334 (84.73%), Postives = 300/334 (89.82%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSM 1004 AVSAAKAVGYHNAGTVEFIVDT TG FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQ QVPLSGH+FEARIYAENVPKGFLPATGVL HYHPVP SSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENR+AALVKLKDCL KFQVAG+PTNINFLQKLANH+AFEEG+VETHFIEHH DDLFVDPNNK I E+AY AARL A LVAACLCE+E S +KESH G PSLL IWYAH PFRVNHHAQ TME EWEN Y+SSSSKPLML+ITY DGNY I QIGEN H LEV+AS+LGN++F VE+DG+TM+VSLAVY K M Sbjct: 297 AVSAAKAVGYHNAGTVEFIVDTITGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQVQVPLSGHSFEARIYAENVPKGFLPATGVLRHYHPVPVSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRSAALVKLKDCLSKFQVAGVPTNINFLQKLANHRAFEEGDVETHFIEHHKDDLFVDPNNKEISEEAYDAARLSANLVAACLCEEEHSTLKESHPGGPSLLSIWYAHSPFRVNHHAQSTMELEWENGYDSSSSKPLMLAITYQRDGNYLI---QIGENSAHSLEVRASHLGNNSFRVEADGVTMHVSLAVYIKDKM 627 HSP 2 Score: 179.104 bits (453), Expect = 3.973e-44 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGL+LSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVE GQ VLVLEAMKMEHVVKATSGG V+GLKV AGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLELSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEEGQPVLVLEAMKMEHVVKATSGGYVQGLKVTAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: B9SFG9_RICCO (Acetyl-CoA carboxylase, putative OS=Ricinus communis GN=RCOM_0646250 PE=4 SV=1) HSP 1 Score: 523.087 bits (1346), Expect = 1.458e-171 Identity = 253/333 (75.98%), Postives = 284/333 (85.29%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLM--LSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGY+NAGTVEFIVD +G FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP++Q QVPL GHAFE RIYAENV KGFLPATGVLHHY P+ SSTVRVETGVE+GD VSMHYDPMIAKLVVWGENRAAALVKLKDCL KFQVAG+PTNINFLQKLA+H +FE+GNVETHFIEHH DLF DPNN ++ ++AYS A+ A L+AACLCEK+ SA+KES G SL PIWY+HPPFRV+H A+ TMEFEW+NEY+SS SKPL LSITY PDGNY I+ +IG G L VKA +L + NF VE+DG++MNVSLA Y+K Sbjct: 298 AVSAAKAVGYYNAGTVEFIVDIVSGKFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPLTQSQVPLLGHAFETRIYAENVSKGFLPATGVLHHYRPIAVSSTVRVETGVEEGDTVSMHYDPMIAKLVVWGENRAAALVKLKDCLSKFQVAGVPTNINFLQKLASHTSFEDGNVETHFIEHHKQDLFTDPNNSMLAKEAYSNAKYSASLLAACLCEKQHSALKESPPGHSSLHPIWYSHPPFRVHHLARHTMEFEWDNEYDSSGSKPLTVALSITYLPDGNYLIELGEIGSCG---LVVKAMHLDDCNFRVEADGVSMNVSLAAYSK 627 HSP 2 Score: 151.754 bits (382), Expect = 6.513e-35 Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSD+++TQH T ET SHPPGTVVAPMAGLVVKVLV+DG+KVE GQ +LVLEAMKMEHVVKA G V GL+V AGQQ+SD S+LF IK Sbjct: 644 FRQKLGLDLSDDDKTQHMTDVETASHPPGTVVAPMAGLVVKVLVQDGSKVEEGQPILVLEAMKMEHVVKAPFTGYVRGLQVTAGQQISDNSLLFSIK 740
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: D7TE06_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00460 PE=4 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 5.194e-171 Identity = 252/331 (76.13%), Postives = 280/331 (84.59%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGYHNAGTVEFIVDT +G FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP++Q QVPL GHAFEARIYAENV KGFLPATG+LHHY PVP SSTVRVETGVEQGD VSMHYDPMIAKLVVWGENRAAALVK+KDCL KFQVAGLPTNINFLQKLANH AFE G VETHFIEH DDLFVDP+N ++ +AY AA+ A L+AAC+CEKER +KES G S L IWYA+PPFRV+H A+RTME +W+NEY+SSSSK L SIT+ PDGNY I + GE EVK ++LGN +F VE DG++ +VSLAVY+K Sbjct: 291 AVSAAKAVGYHNAGTVEFIVDTISGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPMNQSQVPLLGHAFEARIYAENVSKGFLPATGILHHYRPVPVSSTVRVETGVEQGDTVSMHYDPMIAKLVVWGENRAAALVKMKDCLSKFQVAGLPTNINFLQKLANHWAFENGKVETHFIEHFKDDLFVDPSNLLLANEAYDAAKFSAVLIAACVCEKERCNLKESPPGGKSSLSIWYAYPPFRVHHSARRTMELDWDNEYDSSSSKLLTFSITFQPDGNYLI---ETGEENSPDWEVKVAHLGNSDFRVEVDGVSRDVSLAVYSK 618 HSP 2 Score: 149.058 bits (375), Expect = 5.195e-34 Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQ++GL LS ++E QHK SFE TSHPPGTVVAPMAGLVVKVLV+DG VE GQ +LVLEAMKMEHVVKA SGG V GL+V AGQQVSDGS LF ++ Sbjct: 635 FRQRVGLQLSADDEAQHKPSFEATSHPPGTVVAPMAGLVVKVLVKDGTNVEEGQPILVLEAMKMEHVVKAPSGGHVHGLQVTAGQQVSDGSFLFSVQ 731
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_SOYBN (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Glycine max GN=MCCA PE=1 SV=2) HSP 1 Score: 473.781 bits (1218), Expect = 1.561e-154 Identity = 232/345 (67.25%), Postives = 274/345 (79.42%), Query Frame = 3 Query: 30 YHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 Y+NAGTVEFIVDT + FYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGE LP+SQ QVPLSGHAFEARIYAENV KGFLPATGVLHHYH VP SS VRVETGV++GD VSMHYDPMIAKLVVWGENRAAALVKLKD L KFQVAGLPTN+NFLQKLANH+AF GNVETHFI+++ +DLFVD NN V ++AY AARL A LVAACL EKE + + G SLLPIWY+ PPFR++H A+R ME EW+NEY S SSK + L+ITY PDG Y I+ +Q NG +LEVK++ + ++ F VE+ G+ +V++AVY+K + I+ C+ + + + L Sbjct: 299 YYNAGTVEFIVDTVSDEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQILVANGEALPLSQSQVPLSGHAFEARIYAENVQKGFLPATGVLHHYH-VPVSSAVRVETGVKEGDKVSMHYDPMIAKLVVWGENRAAALVKLKDSLSKFQVAGLPTNVNFLQKLANHRAFAIGNVETHFIDNYKEDLFVDANNSVSVKEAYEAARLNASLVAACLIEKEHFILARNPPGGSSLLPIWYSSPPFRIHHQAKRRMELEWDNEYGSGSSKIMKLTITYQPDGRYLIETEQ---NGSPVLEVKSTYVKDNYFRVEAAGVINDVNVAVYSKDQIRHIHIWQGSCHHYFREKLGL 639 HSP 2 Score: 136.346 bits (342), Expect = 6.844e-32 Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQ 1749 FR+KLGL+LS++ E+QHK ET+++P GTVVAPMAGLVVKVLVE+ +VE GQ VLVLEAMKMEHVVKA S G V GL++ G+QVSDGSVLF +K Q Sbjct: 633 FREKLGLELSEDEESQHKPKVETSANPQGTVVAPMAGLVVKVLVENKTRVEEGQPVLVLEAMKMEHVVKAPSSGYVHGLQLMVGEQVSDGSVLFSVKDQ 731
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_ARATH (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=MCCA PE=1 SV=2) HSP 1 Score: 453.751 bits (1166), Expect = 9.596e-147 Identity = 225/332 (67.77%), Postives = 257/332 (77.41%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD-PSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAA+AVGY+NAGTVEFIVDT++ FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP+SQ +VP+SGHAFEARIYAENVPKGFLPATGVL+HY PV S +VRVETGVEQGD VSMHYDPMIAKLVVWG NR ALVKLKDCL FQVAG+PTNINFLQKLA+HK F GNVETHFIEHH DLF D +N E AY A + A LVAAC+ E S ES+ G PS IWY++PPFRV+H A++T+E EW NE E + S + L + Y PDG+Y I+ N LE++ + G +F VE+ GL+MNVSLA Y K Sbjct: 295 AVSAARAVGYYNAGTVEFIVDTESDQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPLSQSEVPMSGHAFEARIYAENVPKGFLPATGVLNHYRPVAVSPSVRVETGVEQGDTVSMHYDPMIAKLVVWGGNRGEALVKLKDCLSNFQVAGVPTNINFLQKLASHKEFAVGNVETHFIEHHKSDLFADESNPAATEVAYKAVKHSAALVAACISTIEHSTWNESNHGKVPS---IWYSNPPFRVHHEAKQTIELEWNNECEGTGSNLISLGVRYQPDGSYLIEEG----NDSPSLELRVTRAGKCDFRVEAAGLSMNVSLAAYLK 619 HSP 2 Score: 142.124 bits (357), Expect = 1.027e-33 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 1 Query: 1453 FRQKLGLDLS-DENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 F+QK+G++ S DE QH+TS ET+SHPPGT+VAPMAGLVVKVLVE+ AKV+ GQ +LVLEAMKMEHVVKA S G ++ LKV AGQQVSDGS LFRIK Sbjct: 636 FKQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSSGSIQDLKVKAGQQVSDGSALFRIK 733
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_ORYSJ (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=MCCA PE=2 SV=2) HSP 1 Score: 424.091 bits (1089), Expect = 2.778e-135 Identity = 208/331 (62.84%), Postives = 253/331 (76.44%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGY++AGTVEFIVDT +G FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIR+ANGE LP+SQ+QVPL+GHAFEARIYAENVP+GFLPATG LHHY PVP ++TVRVETGVE+GD VSMHYDPMIAKLVVWGE+R AALVKLK+ L FQ+AGLPTN+ FLQ+LA H AFE+G V+THFIE + +DL + ++ A LGA L AAC+C+K+ + + S L +WYAHPPFR++H A+R MEFE + E SS L LS+TY DG YF++ + G L+VK + G+ +F V+ GL +V+LA Y+K Sbjct: 296 AVSAAKAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLPLSQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRPVPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNFQIAGLPTNVGFLQELAGHSAFEKGLVDTHFIERYQNDLLSTSTQAL--SGSHEAEELGAILAAACICKKDHVSSEVSLHDKK--LSMWYAHPPFRMHHFAKRLMEFELDRELGGSSDDLLKLSVTYRSDGTYFVETEDGSSPG---LDVKVDSRGDHDFRVDVGGLQTDVTLAFYSK 619 HSP 2 Score: 119.013 bits (297), Expect = 2.361e-26 Identity = 60/97 (61.86%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 +RQ L + S ++ +Q S E SHP G+V+APMAGLVVKVL++DGA+VE GQ V+V+EAMKMEHVVKA G VEGLK AGQQV D SVLF +K Sbjct: 636 YRQTLRAEQSPDDSSQPSASSEARSHPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVK 732
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_RAT (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 3.907e-75 Identity = 141/289 (48.79%), Postives = 186/289 (64.36%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQ 869 AV AAKAV Y AGTVEFI+D+K +FYFMEMNTRLQVEHPVTEMI G DLVEWQ+R+A GE +P+SQ+++PL GHAFEARIYAE+ F+P G L H PP + R+ETGV QGD VS+HYDPMIAKLVVW +R +AL KL+ L ++ + GL TN++FL +L+ H FE GNV T FI H+ DL P + I +++ A LG L EKE ++ + H+ D P ++ R+N R M S +++++TY+ DG+Y +Q Sbjct: 302 AVRAAKAVNYVGAGTVEFIMDSKH-NFYFMEMNTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEIPLQGHAFEARIYAEDPDNNFMPGAGPLVHLSTPPPDMSTRIETGVRQGDEVSVHYDPMIAKLVVWASDRQSALSKLRYSLHQYNIVGLRTNVDFLLRLSGHSEFEAGNVHTDFIPQHHKDLL--PTHSTIAKESVCQAALG-----LILKEKEMTSAFKLHTQD-QFSPFSFSSGR-RLNISYTRNMTLR-------SGKNDIIIAVTYNRDGSYDMQ 573
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_MOUSE (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus GN=Mccc1 PE=1 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 1.094e-69 Identity = 131/280 (46.79%), Postives = 179/280 (63.93%), Query Frame = 3 Query: 30 YHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQ 869 Y AGTVEFI+D++ +FYFMEMNTRLQVEHPVTEMI G DLVEWQ+R+A GE +P+SQ+++PL GHAFEARIYAE+ F+P G L H + R+ETGV QGD VS+HYDPMIAKLVVW +R +AL KL+ CL ++ + GL +N++FL +L+ H FE GNV T FI H+ DL P++ I +++ A LG L EKE ++ + H+ D P ++ R+N R M S +++++TY+ DG+Y +Q Sbjct: 311 YVGAGTVEFIMDSRH-NFYFMEMNTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEIPLQGHAFEARIYAEDPDNNFMPGAGPLVHLSTPSADMSTRIETGVRQGDEVSVHYDPMIAKLVVWASDRQSALSKLRYCLHQYNIVGLRSNVDFLLRLSGHPEFEAGNVHTDFIPQHHKDLL--PSHSTIAKESVCQAALG-----LILKEKEMTSAFKLHTQD-QFSPFSFSSGR-RLNISYTRNMTLR-------SGKSDIVIAVTYNRDGSYDMQ 573
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_HUMAN (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens GN=MCCC1 PE=1 SV=3) HSP 1 Score: 238.81 bits (608), Expect = 2.580e-66 Identity = 136/295 (46.10%), Postives = 173/295 (58.64%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPF------RVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQ 869 AV AAKAV Y AGTVEFI+D+K +F FMEMNTRLQVEHPVTEMI G DLVEWQ+R+A GE +P+SQ+++ L GHAFEARIYAE+ F+P G L H + R+ETGV QGD VS+HYDPMIAKLVVW +R AAL KL+ L ++ + GL TNI+FL L+ H FE GNV T FI H+ L + + K +++ A LG L KE D L PF R+N R M + + +++TY+ DG+Y +Q Sbjct: 306 AVRAAKAVNYVGAGTVEFIMDSKH-NFCFMEMNTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPSNNFMPVAGPLVHLSTPRADPSTRIETGVRQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRQYNIVGLHTNIDFLLNLSGHPEFEAGNVHTDFIPQHHKQLLL--SRKAAAKESLCQAALGLIL-------------KEKAMTDTFTLQAHDQFSPFSSSSGRRLNISYTRNMTLK-------DGKNNVAIAVTYNHDGSYSMQ 577
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: MCCA_DICDI (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=mccA PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 2.115e-60 Identity = 118/256 (46.09%), Postives = 159/256 (62.11%), Query Frame = 3 Query: 27 GYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWEN 794 GY AGTVEFI+ + F+FMEMNTRLQVEHP+TEMI QDLVEWQ++VA + LP+ Q+Q+ + GH+FEARIYAEN FLP TG L H PS T+RVETGV QGD VS++YDPMIAKLVVW ++R AL L++ L ++ + GL TNI+FL++L+ H +F G VET FI H + L A A L A + ++ DP+ W + FR+NH+ ++ ++F ++ Sbjct: 295 GYVGAGTVEFIL-SADNSFFFMEMNTRLQVEHPITEMITKQDLVEWQLKVAESQTLPMEQEQLKIHGHSFEARIYAENPDSDFLPGTGKLAHLSTPTPSDTLRVETGVRQGDEVSVYYDPMIAKLVVWDQDREKALRYLRNALDEYHIIGLNTNISFLKRLSTHPSFMAGEVETGFIPIHRESLM-----------APQAPMSDDSLALAATSLLLKEITQQKSKEDPN--SPWSSLGGFRINHNLKKQVKFNQKD 536 HSP 2 Score: 56.9954 bits (136), Expect = 5.244e-7 Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1 Query: 1537 GTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVL 1731 G++V+PM G + KV+V G V+ GQ +L++EAMKMEH +++ G VE L + V D L Sbjct: 631 GSLVSPMPGKITKVMVNVGDMVKKGQPILLMEAMKMEHTIRSPIDGKVESLPYNVNEIVEDKKTL 695
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC2_BACSU (Biotin carboxylase 2 OS=Bacillus subtilis (strain 168) GN=accC2 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.195e-50 Identity = 97/188 (51.60%), Postives = 126/188 (67.02%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHH 566 AV AAKA+GY NAGT+EFIVD K +FYF+EMNTRLQVEHPVTE I G DLVE Q+R+A G L SQ + +GHA E RIYAE+ PK F P+ G + + +P VR E V + V+ YDPMIAK++V G+ R A+ KL+ L ++V G+ TN+ L + A KAF+EG+V T F++ H Sbjct: 259 AVKAAKAIGYTNAGTIEFIVDQKQ-NFYFLEMNTRLQVEHPVTEEITGLDLVEQQLRIAAGHTLTFSQKDIQRNGHAIEVRIYAED-PKTFFPSPGTITAF-SLPDQKGVRHECAVAKDSTVTPFYDPMIAKMIVKGQTRTEAIEKLETALRDYRVEGIKTNLPLLIQAAATKAFKEGDVTTDFLKQH 443
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: PCCA_CAEEL (Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Caenorhabditis elegans GN=pcca-1 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.355e-48 Identity = 90/186 (48.39%), Postives = 130/186 (69.89%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGF-LPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFI 557 AV AKAVGY +AGTVEF+VD++ +FYF+EMNTRLQVEHP+TE I G D+V+ +RV+ G PLPI+Q+QVPL+G AFE+R+YAE+ KGF LP+ G L Y VR ++G+ +G +S++YDP+I KLV G+NR AL ++++ L + + G+ NI L+ + K F G++ T ++ Sbjct: 306 AVQLAKAVGYDSAGTVEFLVDSQR-NFYFLEMNTRLQVEHPITECITGIDIVQQMLRVSYGHPLPITQEQVPLNGWAFESRVYAEDPYKGFGLPSVGRLSRYVEPKHVDGVRCDSGIREGSEISIYYDPLICKLVTHGDNREQALNRMQEALDNYVIRGVTHNIPLLRDIVQEKRFRTGDITTKYL 490
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC_NOSS1 (Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=accC PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.161e-47 Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHN 569 AV AA+ + Y AGT+EF++D ++G FYFMEMNTR+QVEHPVTEM+ G DL+ QIR+A GE L ++QDQV L GHA E RI AE+ F PA G + Y P P VR+++ V + +YD +I KL+VWG +RA A+ ++K L + + GLPT I F Q++ + F +GNV T F++ N Sbjct: 260 AVKAAQFINYTGAGTIEFLLD-RSGQFYFMEMNTRIQVEHPVTEMVTGVDLLVEQIRIAQGERLRLTQDQVVLRGHAIECRINAEDPDHDFRPAPGRISGYLP-PGGPGVRIDSHVYTDYQIPPYYDSLIGKLIVWGPDRATAINRMKRALRECAITGLPTTIGFHQRIMENPQFLQGNVSTSFVQEMN 446 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021259 ID=g.arboreum_cottongen_reftransV1_0021259; Name=g.arboreum_cottongen_reftransV1_0021259; organism=Gossypium arboreum; type=contig; length=2207bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|