g.arboreum_cottongen_reftransV1_0011422, g.arboreum_cottongen_reftransV1_0011422 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0B0N6L1_GOSAR (UV radiation resistance-associated protein OS=Gossypium arboreum GN=F383_11128 PE=4 SV=1) HSP 1 Score: 437.958 bits (1125), Expect = 1.216e-144 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS 631 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS Sbjct: 153 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS 362
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2S0R3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G223000 PE=4 SV=1) HSP 1 Score: 427.557 bits (1098), Expect = 1.744e-140 Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS 631 KNMQRKLRARQQYMISQVSLLYPVK LVGPAQE+ELESYPSSSRLGNSSVSKPIN GTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLD SWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS Sbjct: 153 KNMQRKLRARQQYMISQVSLLYPVKSLVGPAQEEELESYPSSSRLGNSSVSKPINYGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDLSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDTS 362
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0B0N9A8_GOSAR (Hepatoma-derived growth factor-related 2 OS=Gossypium arboreum GN=F383_11127 PE=4 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 3.298e-117 Identity = 212/236 (89.83%), Postives = 223/236 (94.49%), Query Frame = -2 Query: 947 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1654 ++QSSPQLAYQ PVPH++RGTPNGNQ+VQ++G+ HGGHIDA+VK+ELF QQSPCF G NSRE SGY SSRQL+YGHNEMYLNA SSQPSQQFQPGN AFVQRPL PSLPQTSSSHFSFTKPSMPPHPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE Sbjct: 1196 SMQSSPQLAYQAPVPHDYRGTPNGNQMVQISGSAPHGGHIDAAVKNELFLQQSPCFPTGTRNSREASGYNSSRQLEYGHNEMYLNAPSSQPSQQFQPGNTAFVQRPLPPSLPQTSSSHFSFTKPSMPPHPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1431 HSP 2 Score: 62.7734 bits (151), Expect = 8.637e-7 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = -2 Query: 1904 VDGELEMEDVSGHLKNDQP-FTNDALQMDWQQQG---IMEPASNSSN 2032 VDGELEMEDVS H K+D+P FTND+L+ D QQQG IMEPAS+S N Sbjct: 1070 VDGELEMEDVSAHQKDDRPSFTNDSLEKDMQQQGTDRIMEPASSSPN 1116
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2S7Z3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G222800 PE=4 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 3.697e-117 Identity = 209/236 (88.56%), Postives = 221/236 (93.64%), Query Frame = -2 Query: 947 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1654 ++QSSPQLAYQ PVPH++RGTPNGNQ+VQ++G+ HGGHIDA+VK+ELF QQSPCF G NSRE SGY SSRQL+YGHNEMYLNA SSQPSQQFQPGN AFVQRPL PSLPQTSSSHFSFTKPSMP HPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGER PSNN+AFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE Sbjct: 1008 SMQSSPQLAYQAPVPHDYRGTPNGNQMVQISGSAPHGGHIDAAVKNELFLQQSPCFPTGARNSREASGYNSSRQLEYGHNEMYLNAPSSQPSQQFQPGNTAFVQRPLPPSLPQTSSSHFSFTKPSMPLHPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERTPSNNLAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1243 HSP 2 Score: 62.7734 bits (151), Expect = 7.359e-7 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = -2 Query: 1904 VDGELEMEDVSGHLKNDQP-FTNDALQMDWQQQG---IMEPASNSSN 2032 VDGELEMEDVS H K+D+P FTND+L+ D QQQG IMEPAS+S N Sbjct: 882 VDGELEMEDVSAHQKDDRPSFTNDSLEKDMQQQGNDRIMEPASSSPN 928
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2NWU9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G222800 PE=4 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 3.436e-116 Identity = 209/236 (88.56%), Postives = 221/236 (93.64%), Query Frame = -2 Query: 947 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1654 ++QSSPQLAYQ PVPH++RGTPNGNQ+VQ++G+ HGGHIDA+VK+ELF QQSPCF G NSRE SGY SSRQL+YGHNEMYLNA SSQPSQQFQPGN AFVQRPL PSLPQTSSSHFSFTKPSMP HPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGER PSNN+AFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE Sbjct: 1192 SMQSSPQLAYQAPVPHDYRGTPNGNQMVQISGSAPHGGHIDAAVKNELFLQQSPCFPTGARNSREASGYNSSRQLEYGHNEMYLNAPSSQPSQQFQPGNTAFVQRPLPPSLPQTSSSHFSFTKPSMPLHPQHSYPPQYSLPSQHDGRRPFVSDEQWRMPAGEYIAGRNPPSAGPLFVQEAYFRPPGERTPSNNLAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPARE 1427 HSP 2 Score: 62.7734 bits (151), Expect = 8.486e-7 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = -2 Query: 1904 VDGELEMEDVSGHLKNDQP-FTNDALQMDWQQQG---IMEPASNSSN 2032 VDGELEMEDVS H K+D+P FTND+L+ D QQQG IMEPAS+S N Sbjct: 1066 VDGELEMEDVSAHQKDDRPSFTNDSLEKDMQQQGNDRIMEPASSSPN 1112
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A061ESI8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020292 PE=4 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 2.676e-115 Identity = 173/209 (82.78%), Postives = 188/209 (89.95%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 +N+QRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGN SVSKPIN G+LTILGLHLTM PFTKMSFFTDKKEVQ+SATALGYVAH VSLIASYLQVPLRYP+ LGGS SY+ND P A PT+ D SW T LS VKPVEFPLFL+GQDTT+AAYA+FLL+KDIEQLLNF+ SLGPRH++ NLKELLR VQSSE+IDT Sbjct: 153 QNVQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNYSVSKPINQGSLTILGLHLTMLPFTKMSFFTDKKEVQRSATALGYVAHGVSLIASYLQVPLRYPVHLGGSRSYINDYAPSAEPTSSDLSWNTALSVNVKPVEFPLFLEGQDTTKAAYAVFLLNKDIEQLLNFVSGKSLGPRHVLENLKELLRTVQSSEYIDT 361
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2N790_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G031400 PE=4 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 8.561e-113 Identity = 171/209 (81.82%), Postives = 187/209 (89.47%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 KN+QR LRARQQYMISQVSLLYPVKILVGPAQEQELESY SSSRLGN S SKP+N G+LTILGL+LT+ PFTKMSFFTDKKEVQ+SATALGYVAHAVSLIASYLQVPLRYPLRLGGS SY+ND+ P + D S T LSA VKP EFPLFL+GQDTTRAAYA+FLL+KD+EQLLNFIG SLGPRH++ANLKELLRCVQSSE+IDT Sbjct: 152 KNVQRMLRARQQYMISQVSLLYPVKILVGPAQEQELESYSSSSRLGNPSASKPVNQGSLTILGLNLTLLPFTKMSFFTDKKEVQRSATALGYVAHAVSLIASYLQVPLRYPLRLGGSRSYINDHASSIDPASSDLSLDTTLSANVKPAEFPLFLEGQDTTRAAYAVFLLNKDMEQLLNFIGVKSLGPRHVLANLKELLRCVQSSEYIDT 360
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A061EJS2_THECC (Tudor/PWWP/MBT domain-containing protein, putative isoform 6 OS=Theobroma cacao GN=TCM_020299 PE=4 SV=1) HSP 1 Score: 374.015 bits (959), Expect = 1.115e-110 Identity = 207/244 (84.84%), Postives = 216/244 (88.52%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRM-PAGEY---------IAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 +IQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT+HGGHIDA++KSELFPQQSPCF GVCNSREPSGY SSR L+YGHNEMYLNAQSSQPSQQFQPGN FVQRPL PSLPQTSSSHFSFTKP+MPPHPQHSYPPQY LPSQHDGRRPF++DEQWRM PAGEY IAGRNP AGPLFVQE YFRPP ERPPSNNM FPI STN LPAGAPNSGHGVS M+PCRPD S INCWRPA Sbjct: 1013 SIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTSHGGHIDAAMKSELFPQQSPCFPTGVCNSREPSGYNSSRPLEYGHNEMYLNAQSSQPSQQFQPGNTGFVQRPLHPSLPQTSSSHFSFTKPAMPPHPQHSYPPQYPLPSQHDGRRPFLADEQWRMPPAGEYNTDNQRGGWIAGRNPSPAGPLFVQEGYFRPPVERPPSNNMGFPITSTNNLPAGAPNSGHGVSQMMPCRPDSSAINCWRPA 1256
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A061EJR8_THECC (Tudor/PWWP/MBT domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020299 PE=4 SV=1) HSP 1 Score: 374.015 bits (959), Expect = 5.843e-110 Identity = 207/244 (84.84%), Postives = 216/244 (88.52%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRM-PAGEY---------IAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 +IQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT+HGGHIDA++KSELFPQQSPCF GVCNSREPSGY SSR L+YGHNEMYLNAQSSQPSQQFQPGN FVQRPL PSLPQTSSSHFSFTKP+MPPHPQHSYPPQY LPSQHDGRRPF++DEQWRM PAGEY IAGRNP AGPLFVQE YFRPP ERPPSNNM FPI STN LPAGAPNSGHGVS M+PCRPD S INCWRPA Sbjct: 1172 SIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTSHGGHIDAAMKSELFPQQSPCFPTGVCNSREPSGYNSSRPLEYGHNEMYLNAQSSQPSQQFQPGNTGFVQRPLHPSLPQTSSSHFSFTKPAMPPHPQHSYPPQYPLPSQHDGRRPFLADEQWRMPPAGEYNTDNQRGGWIAGRNPSPAGPLFVQEGYFRPPVERPPSNNMGFPITSTNNLPAGAPNSGHGVSQMMPCRPDSSAINCWRPA 1415
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A061ESJ6_THECC (Tudor/PWWP/MBT domain-containing protein, putative isoform 2 OS=Theobroma cacao GN=TCM_020299 PE=4 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 9.930e-110 Identity = 207/244 (84.84%), Postives = 216/244 (88.52%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRM-PAGEY---------IAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 +IQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT+HGGHIDA++KSELFPQQSPCF GVCNSREPSGY SSR L+YGHNEMYLNAQSSQPSQQFQPGN FVQRPL PSLPQTSSSHFSFTKP+MPPHPQHSYPPQY LPSQHDGRRPF++DEQWRM PAGEY IAGRNP AGPLFVQE YFRPP ERPPSNNM FPI STN LPAGAPNSGHGVS M+PCRPD S INCWRPA Sbjct: 1209 SIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTSHGGHIDAAMKSELFPQQSPCFPTGVCNSREPSGYNSSRPLEYGHNEMYLNAQSSQPSQQFQPGNTGFVQRPLHPSLPQTSSSHFSFTKPAMPPHPQHSYPPQYPLPSQHDGRRPFLADEQWRMPPAGEYNTDNQRGGWIAGRNPSPAGPLFVQEGYFRPPVERPPSNNMGFPITSTNNLPAGAPNSGHGVSQMMPCRPDSSAINCWRPA 1452
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: HUA2_ARATH (ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana GN=HUA2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.124e-22 Identity = 95/223 (42.60%), Postives = 132/223 (59.19%), Query Frame = -2 Query: 953 NGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVP-GVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPS-MXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPA---------GEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1588 G+QIVQ GN++ GG ++ + K E F QQS F P GVC+SREPS + SSRQL++G++++ N ++S + +FQP + QRP+ LP SSHFS+ PS + QHSY Y P Q D R + ++E WR+P+ G +I GRN P V +++FRPP ERPPS M + ++ + L A GH MLP RPD+ T+NCWRPA Sbjct: 1175 TGDQIVQGPGNSSRGGLVEGAGKPEYFVQQSSSFSPAGVCSSREPSSFTSSRQLEFGNSDVLFNPEASSQNHRFQP-STPLSQRPMV-RLPSAPSSHFSY--PSHIQSQSQHSYTHPYPFPPQRDDARRYRNEEPWRIPSSGHSAENQNGAWIHGRNSHPGLPR-VTDSFFRPPPERPPSGTMNYQPSAASNLQAVPAIPGHTAPQMLPSRPDIPTVNCWRPA 1392
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: HUAL1_ARATH (HUA2-like protein 1 OS=Arabidopsis thaliana GN=At5g08230 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.533e-22 Identity = 88/240 (36.67%), Postives = 127/240 (52.92%), Query Frame = -2 Query: 953 QLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVP-GVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSF-TKPSMXXXXXXXXXXXXSLPSQ-HDGRRPFVSDEQWRMP---------AGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1636 Q YQ + + NQI + N AHG H D VKSE QS F P G+C+ EP ++SS+QL+YG++++ ++S +QQ +P N +F+QRP+ +L SSHF + + S+P Y PSQ DGR+ +E+WRMP G +I RN P G V + F+PP ERPPS + + +A+ N L G+ SG+ S ML RPDV + +RP+ Sbjct: 1210 QHEYQISMQRDHSSIATSNQIAPVPVNAAHGRHADGGVKSEYLMPQSSSFAPVGMCSYGEPLPFISSKQLEYGNSDVLFKQEASSQNQQLRPINTSFLQRPMIRNLAPAPSSHFPLPCRIVQSEPQRSSFPHPYHFPSQPVDGRQHM--NEEWRMPPNGCSADPQYGAWIGVRN-PFPGSRTVTDGVFQPPPERPPSGTVRYQLAA-NNLQGGSTISGNIASQMLLSRPDVPSAAQYRPS 1445
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: UVRAG_HUMAN (UV radiation resistance-associated gene protein OS=Homo sapiens GN=UVRAG PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.025e-11 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 2 Query: 260 ATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELL 595 A ALGY AH VS+I+ +LQVPLRYP+ GS S + DN+ T K EFPL+ KG + + Y ++LL+K+I QL G + R + NLK + Sbjct: 361 AVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNIND--------------KLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQHGLGTPDLRQTLPNLKNFM 458
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: UVRAG_MOUSE (UV radiation resistance associated protein OS=Mus musculus GN=Uvrag PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 7.663e-11 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 2 Query: 260 ATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELL 595 A ALGY AH VS+I+ +LQVPLRYP+ GS S + DN+ T K EFPL+ KG + + Y ++LL+K+I QL G + R + NLK + Sbjct: 360 AVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNIND--------------KLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQHGLGTPDLRQTLPNLKNFM 457 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011422 ID=g.arboreum_cottongen_reftransV1_0011422; Name=g.arboreum_cottongen_reftransV1_0011422; organism=Gossypium arboreum; type=contig; length=2033bpback to top |