g.arboreum_cottongen_reftransV1_0008254, g.arboreum_cottongen_reftransV1_0008254 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0B0MZ94_GOSAR (tRNA (Ile)-lysidine synthase OS=Gossypium arboreum GN=F383_34300 PE=4 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKSLLHRRDRALSRLRSSSSSNPSPNSVLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN Sbjct: 1 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKSLLHRRDRALSRLRSSSSSNPSPNSVLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN 343
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0D2R7Q7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G139000 PE=4 SV=1) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 327/343 (95.34%), Postives = 332/343 (96.79%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHR PEVS RWLMPTPKISL+DFKSLLHRRDRALSRLRSSSSSNP+ NS LK+QIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDG CLVKSEDEQTEKD+NLQVDEK PEEAKTN+EVSDKINDFNGKE RKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRN TQGTVNRPAVP QVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNV SHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN Sbjct: 1 MVAISLYRGNLHRTPEVSRRWLMPTPKISLRDFKSLLHRRDRALSRLRSSSSSNPNSNSALKYQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGRDCLVKSEDEQTEKDVNLQVDEKLPEEAKTNLEVSDKINDFNGKETRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNSTQGTVNRPAVPFQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVASHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN 343
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: S1RW18_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_045716 PE=4 SV=1) HSP 1 Score: 426.017 bits (1094), Expect = 2.520e-143 Identity = 258/346 (74.57%), Postives = 283/346 (81.79%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKX---XXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHRAP + RWLMPTPKISL+DFKS ++ L SS + NP+P S LK IQSP PIEPKL A+++PEP + L GP VKV+++GGSDGG C VK EDEQ EKD LQVDEK PEE K NVEVS+K+N+ N KEKRKRDVEEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN G RPAVPLQVET NDSGS+TR+VTPRMG +ANLAGEN+ EADDVSN NVH+RHVFRMSSTSPSSESPLRRPTYIQHNVV HPSR SMGVTGSPSRFAPTGNQGHPGNPP VSVSGTN+VASSPSPAASGG+SV REA QPSPWN Sbjct: 1 MVAISLYRGNLHRAPAIPRRWLMPTPKISLEDFKSLLHRRNKALSRLRSSSSSCNPNPNPASNLKPHIQSPKPNGLPIEPKLGAQVDPEPPQDLTAGPTSAVVKVEVLGGSDGGDCSVKQEDEQPEKDETLQVDEKLPEETKANVEVSEKVNELNEKEKRKRDVEEKLQILNAKKHNLVQVLKQILNAEEELKRRNSPPGMAIRPAVPLQVETMNDSGSITRIVTPRMGSEANLAGENEVGEADDVSNANVHNRHVFRMSSTSPSSESPLRRPTYIQHNVVPHPSRASMGVTGSPSRFAPTGNQGHPGNPPAVSVSGTNYVASSPSPAASGGSSVFREARQPSPWN 346
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: S1SI09_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_045716 PE=4 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 5.036e-102 Identity = 199/281 (70.82%), Postives = 222/281 (79.00%), Query Frame = -2 Query: 437 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKX---XXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVV 1270 MVAISLYRGNLHRAP + RWLMPTPKISL+DFKS ++ L SS + NP+P S LK IQSP PIEPKL A+++PEP + L GP VKV+++GGSDGG C VK EDEQ EKD LQVDEK PEE K NVEVS+K+N+ N KEKRKRDVEEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN G RPAVPLQVET NDSGS+TR+VTPRMG +ANLAGEN+ EADDVSN NVH+RHVFRMSSTSPSSESPLRRPTYIQHNV Sbjct: 1 MVAISLYRGNLHRAPAIPRRWLMPTPKISLEDFKSLLHRRNKALSRLRSSSSSCNPNPNPASNLKPHIQSPKPNGLPIEPKLGAQVDPEPPQDLTAGPTSAVVKVEVLGGSDGGDCSVKQEDEQPEKDETLQVDEKLPEETKANVEVSEKVNELNEKEKRKRDVEEKLQILNAKKHNLVQVLKQILNAEEELKRRNSPPGMAIRPAVPLQVETMNDSGSITRIVTPRMGSEANLAGENEVGEADDVSNANVHNRHVFRMSSTSPSSESPLRRPTYIQHNVC 281
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: M5WUN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007601mg PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 6.793e-85 Identity = 201/364 (55.22%), Postives = 245/364 (67.31%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPI----EPKLKAKLEPEPSEGLKTGPPL----------QEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVD------EKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTG-SPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHR P+V RWLMPTPKISLKDFKSLL RR ALSR+RS+ + S + + ++ P + PK+K + + GP + V V GSD E+ +++ V+ EK EE K N E +K + + K+KRKR+VEEKLQVLN +KH++VQVLKQ+LNAEEELKRR+G QG V RP+V LQV+ TNDSGSMTR R+G +ANL E +G E D+ SNHN HSRH+FRM+STSPSSESPLRRPT+IQHNVVSHPSR +G TG SPSRFAP G+QG+P PT+SVSGTN++ASSPSPAASGGTS R+A PSPWN Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPTPKISLKDFKSLLTRRSIALSRVRSTLPATSSNPNPNPSFVSEQLNEAPKMNTLTHPKIKFEAPENVVADCEAGPSGVDKDEKQSDGADFTVKPVDGSDASPAFKPDLPEKGSDAVDVGVNSPAVKVEKVDEEGKPNSEAHNKEDVLDEKQKRKREVEEKLQVLNQRKHTIVQVLKQMLNAEEELKRRSGMQGMVVRPSVSLQVDVTNDSGSMTRHAAARLGSEANL--EMEGCEGDEHSNHNFHSRHIFRMNSTSPSSESPLRRPTHIQHNVVSHPSRAILGATGSSPSRFAPAGHQGNPATLPTLSVSGTNYMASSPSPAASGGTSAFRDARLPSPWN 362
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A5C7N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05390 PE=4 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.098e-83 Identity = 194/390 (49.74%), Postives = 232/390 (59.49%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEP-PIEPKLKAKLEPEPSEGLKT-GPPLQEVKVDIVG--------------------GSDGGGCLVKS-------------------------EDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHR P+V+ RWLMPT ISLKDF+SLL RR ALS + + + S P PI K+K + E EP+ + P +E ++ GSDG C+ KS + Q EK + V + P EA NV D +ND +EKRKR++EEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN QG RP+ PL ++TTNDSGS+TR VTPR+G DANL GE +G E DD+SNHN+HSRH+ S++ S R YIQHN V HPSR TGSPSRFAP +Q HP N PTVSVSGTN++ASSPSPAASGGTSV R+A PSPWN Sbjct: 1 MVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALS----------------RLRSAAGTSSNPNPILHKVKLEKEEEPTNAIGCPARPQEEQPPKVINPEEEEEEEKPALNGKGKEGKGSDGDDCVAKSVGVSGSSPGSNPIVPGNASDPADGHGNSQGEKAV--AVSQNPNLEANKNV---DAVND---QEKRKREIEEKLQILNAKKHNLVQVLKQILNAEEELKRRNNMQGMTIRPSGPLHIDTTNDSGSLTRQVTPRLGSDANLGGEMEGGEPDDISNHNMHSRHLL-RMSSTSPSSDSPLRRPYIQHNAVPHPSR----ATGSPSRFAPIVHQSHPANLPTVSVSGTNYIASSPSPAASGGTSVFRDARLPSPWN 361
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A067KH81_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11555 PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.168e-80 Identity = 203/367 (55.31%), Postives = 249/367 (67.85%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEP--PIEPKLKA-KLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSED--------------EQTEKDINLQVDEKPPEE-------AKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHR P+V RWLMP +ISLKDFKSLL RR +ALSRLR S+++ + ++ P + E PI P+LK K+ EG G +EVK + G + G C V+ D E++++ + + +P +E +T + +D IN + KE RK++VEEKL VLN KKHSLVQVLKQILN EEELKRRN QG RP+VPLQV+ TNDSGS++R TPRMG +ANL G+ +G E +DVS + SRH+ RMSSTSPSSESPLR+P YIQHNVV HPSR S+G T SPSRFA TG+QG P + PTVSVSGTN+VASSPSPAASGGTS R+A QPSPWN Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPARQISLKDFKSLLDRRSKALSRLRPSTNAVATTSNHNPKPNPDPNTKENGIPITPELKVDKVNNNEEEGTSNGLVSEEVKDQV--GLEYGECSVRPADVSNSLLPPEKPEVAEKSDEAVTGDGNLRPRKEDLSVNPNTETEMCKTDVIN--HDKENRKKEVEEKLLVLNEKKHSLVQVLKQILNVEEELKRRNSVQGMAIRPSVPLQVDVTNDSGSLSRHATPRMGSEANLGGDMEGAETEDVSKPSNQSRHIHRMSSTSPSSESPLRKPPYIQHNVVPHPSRPSLGATSSPSRFALTGHQGPPASVPTVSVSGTNYVASSPSPAASGGTSAFRDARQPSPWN 363
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: B9I329_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s07460g PE=4 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 7.528e-77 Identity = 196/365 (53.70%), Postives = 239/365 (65.48%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKA----------KLEPEPSEGLKTGPPL------QEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKT-NVEVSDKINDFN-GKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPT--YIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNF--VXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLH +V RWLMPTPKIS +DFK+L HRR +AL RLRS+++SNP+ N + K PIEPKL+A E E +E K G ++ K D+ G DG +K D+ D N +KP + A +VE N+ + KEKRKR++E+KLQVLNAKKH+LV+ LKQILN EEELKRRN TQG RP+V LQV+ +NDSGSMTR TPRMG +AN G+ +G EA+D+SNHN HSRHV RMSSTSPS S YIQ NVV HPSR+ +G +GSPSRFAP G+ GHP N PT+SVSGT + + SPSPAASGGTS ++A PSPWN Sbjct: 1 MVAISLYRGNLHSVADVPRRWLMPTPKISPRDFKTLCHRRSKALCRLRSTTTSNPNSNHIEK----------APIEPKLEAVEEEIVANNNGKEAEQAEDCKGGGDGGASSSREDEKDDV--GLDGADFSMKPADDAVNGDPNPNNLQKPDDVANNPSVETKSNANELDEEKEKRKREIEDKLQVLNAKKHNLVKALKQILNVEEELKRRNSTQGMPVRPSVQLQVDVSNDSGSMTRHPTPRMGSEANPGGDIEGGEAEDISNHNTHSRHVHRMSSTSPSPSSESPLRRPPYIQPNVVPHPSRSGLGTSGSPSRFAPMGHHGHPLNLPTLSVSGTYYAASSPSPSPAASGGTSAFKDARHPSPWN 353
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0A0LRK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G008420 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.764e-67 Identity = 191/394 (48.48%), Postives = 233/394 (59.14%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEP-------SEGLKTGP---------PLQEVKVDIVG-----------GSD-GGGCLVKSED-------------EQTE----------KDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVAISLYRGNLHR P++ RWLMPT IS+KDFKSLLHRR +ALS ++++P S P KL P P S+G GP PL+ +V + G SD G C+ KS D EQ KD N V E P N E + + + + KE RKR+VEEKL+VLN KKH+LVQVLKQIL+ EEELKRR+ QGT RP+ PLQV+ + D+GSMTR + R+G + N +G +G EADD+ N N +R + R SS SPSSESPLRRP +IQ N+ SHPSRT++ +TGSPS P G G P N PTVSVSGTN+VASSPSPAASGG+SVLR+A QPSPWN Sbjct: 24 MVAISLYRGNLHRVPDIPRRWLMPTHNISIKDFKSLLHRRSKALS------------------RLRAPASSSPA---KLSTSPNPNPITNSLVKSDG--DGPRNNGSAPEVPLESHRVSVGGERPSALVKERKKSDIGDNCIGKSGDGFDSFNGSKPCFAEQGSNPVENGGAHAKDKNPAVSENP------NTEANKEEDLLDDKEDRKREVEEKLKVLNEKKHNLVQVLKQILHVEEELKRRSTVQGTAIRPSAPLQVDASADTGSMTRQLASRVGSEVNASGYIEGGEADDLLNQNFLARQMLRNSSMSPSSESPLRRPVHIQPNMGSHPSRTNLSITGSPSCLPPAGQSGLPPNLPTVSVSGTNYVASSPSPAASGGSSVLRDARQPSPWN 388
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A067FR52_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017821mg PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 4.880e-67 Identity = 189/368 (51.36%), Postives = 232/368 (63.04%), Query Frame = -2 Query: 242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKV---DIV--GGSDGGGCLVKSE---DEQT---------EKDINLQVDEKPPEEAKT-------NVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTG-NQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270 MVA+SLYRGNLHR P+V RWLMP +IS FK +R L + + + + S E + L+ + EG + +E V +I+ G D G C K E D + EK +L V EK E ++ NV+ S+K + GKEKRK+++EEKL+ LNAKKH+LVQ LKQ+L+AEEELKRRN TQG V RP PLQV+ T++SG M R TPR G +ANL G+ +G EA+D SN N HSRH+ RMSS SPSSESPLRRPT +QHNVV HPSR S+ VTGSPSRFAP G +QG+ GN PTV VSGTN+VASSPSPAASGGTSV R+A QPSPWN Sbjct: 1 MVALSLYRGNLHRVPDVPRRWLMPAARIS---FKDFKTLLNRRNRALSRLRQHSLAAGNAITSNPNSNCKQEDEAVKPNGSSLQVQLDEGKEGNCREEERNVKNEEIMDRGKLDDGDCSEKPEPVDDAEVAAVFKVDGDEKLQSLDVVEKAAEPVESADPASNPNVQTSNKPDVLYGKEKRKKEIEEKLETLNAKKHNLVQALKQLLSAEEELKRRNCTQGMVIRPTGPLQVDVTSESGLMARQTTPRTGSEANLVGDTEGAEAEDASNQNAHSRHMLRMSSMSPSSESPLRRPTILQHNVVPHPSRASLAVTGSPSRFAPPGHHQGNSGNLPTVCVSGTNYVASSPSPAASGGTSVFRDARQPSPWN 365 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008254 ID=g.arboreum_cottongen_reftransV1_0008254; Name=g.arboreum_cottongen_reftransV1_0008254; organism=Gossypium arboreum; type=contig; length=1379bpback to top |