g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001270
Unique Nameg.arboreum_cottongen_reftransV1_0001270
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1709
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001270:1..1707 .
Chr7:37337523..37341663 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B0N8L7_GOSAR (Heat shock STI OS=Gossypium arboreum GN=F383_06496 PE=4 SV=1)

HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240
            MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN
Sbjct:    1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 324          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0D2PZQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G024400 PE=4 SV=1)

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAK LETLKSEMSEKYKSEDSWKEMFSFL+ETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEV PRLFKE
Sbjct:    1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKCLETLKSEMSEKYKSEDSWKEMFSFLVETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVFPRLFKE 323          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061ELQ6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1)

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 297/330 (90.00%), Postives = 311/330 (94.24%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSG+G P         +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEMSEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE
Sbjct:    1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 330          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061EL78_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1)

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 297/336 (88.39%), Postives = 311/336 (92.56%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEM------SEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSG+G P         +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEM      SEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE
Sbjct:    1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMVLFSLPSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 336          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HUR9_POPTR (Tetratricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s09300g PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 273/329 (82.98%), Postives = 300/329 (91.19%), Query Frame = 2
Query:  269 MAEAEVGSG------EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS           +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTI L PQWEKGYFRKGC+LE MERYDDALA FQIALQ+NPQS EVSRKIKR+SQLA+DKKRAQEVQ++RSNVD+AK LETLKSEM EK  SE+ +K+MFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPH+HS+CFSFLRQYA+DSFS+AACLV PK+II+YPQVWKGQGSRKWK+GQHDGFFVQ+ES L+RK+WFI+S+NE G+TLCRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAEAEKGSATTGSKESNVKEEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTIKLNPQWEKGYFRKGCVLEGMERYDDALATFQIALQHNPQSTEVSRKIKRISQLARDKKRAQEVQSMRSNVDMAKHLETLKSEMFEKLGSEECFKDMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHSHSNCFSFLRQYADDSFSKAACLVVPKNIISYPQVWKGQGSRKWKYGQHDGFFVQYESHLMRKIWFIASTNEKGQTLCRDPEVLDIGAHEVLPRLFKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A067KVT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 272/324 (83.95%), Postives = 296/324 (91.36%), Query Frame = 2
Query:  269 MAEAEVGSGEGKP-QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MA A   S EG   +E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSNPTLYSNRAAAFL LVKL+KALADAETTITL PQWEKGYFRKGC+LEAMERYDDALAAFQ ALQYNPQS EVSRKIKR+SQLAK+KKRAQEV++++SNVD+A+ L+ LKSEMSEK +SE+ WKE FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAP+VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFI SSNE G+TLCRDPE LDI  HEVLPRLFKE
Sbjct:    1 MATAAAASTEGNGGEEASLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLSKALADAETTITLNPQWEKGYFRKGCVLEAMERYDDALAAFQTALQYNPQSTEVSRKIKRISQLAKEKKRAQEVESIKSNVDMARHLDKLKSEMSEKIESEECWKETFSFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPMVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVVPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFESPFLRKLWFIPSSNEKGQTLCRDPETLDISVHEVLPRLFKE 324          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HK95_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s15630g PE=4 SV=1)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 273/330 (82.73%), Postives = 301/330 (91.21%), Query Frame = 2
Query:  269 MAEAEVGS-------GEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS       G GK +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTITL PQWEKGYFRKGC+LEAME+YD+ALA FQIALQYNP+S EVSRKIKR+SQLAKDKKRAQEV+++RSNV++ K LETLKSEMSE   SE+ +KEMFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CFSFLRQYAEDSFS+AAC+V PK+II+YPQVWKGQGSRKW+HGQHDG FVQ+ESPL+RK+WFI+SSNE G+TLCRDPE+LDI AHEVLPRLFKE
Sbjct:    1 MAEAEKGSATTGSNEGNGK-EEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTITLNPQWEKGYFRKGCVLEAMEQYDNALATFQIALQYNPRSTEVSRKIKRISQLAKDKKRAQEVESMRSNVNMEKHLETLKSEMSEMLGSEECFKEMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTLTDKYAPVVNIDKAFESPHTHGNCFSFLRQYAEDSFSKAACVVVPKNIISYPQVWKGQGSRKWRHGQHDGIFVQYESPLMRKIWFIASSNEKGQTLCRDPEILDISAHEVLPRLFKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9RTL2_RICCO (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis GN=RCOM_0911270 PE=4 SV=1)

HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 271/322 (84.16%), Postives = 295/322 (91.61%), Query Frame = 2
Query:  272 AEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            A A    G G  +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAE TITL PQWEKGYFRKGC+LEAMERYDDA AAFQ AL+YNPQS+EVSRKIKR+SQLAK+KKRAQEV+++RSNVD+AK  + LKSEMSEK  SE+  KE+FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q+DKYAP VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFISS+NE G+TLCRDPE+LDI AHEV PRLFKE
Sbjct:    5 ATAASTDGNGG-EEVSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAEMTITLNPQWEKGYFRKGCVLEAMERYDDASAAFQTALKYNPQSSEVSRKIKRISQLAKEKKRAQEVESMRSNVDLAKHFDKLKSEMSEKIGSEECLKEIFSFLVETMEMAVKSWHETSKVDPRVYFLLDKEKTQSDKYAPAVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQHDGFFVQFESPCLRKLWFISSTNEKGQTLCRDPEMLDISAHEVFPRLFKE 325          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: V4S3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005444mg PE=4 SV=1)

HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0
Identity = 263/310 (84.84%), Postives = 288/310 (92.90%), Query Frame = 2
Query:  308 QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTL+SNRAAAFLHLVKLNKALADAETTI+L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQLAKDKKRAQEV+N+RSNVD+ + L+  KSEMSEKY +E+ WK +FSF++ETMETAVKSWHETSKVD +VYFLLDKEK+  +KYAP+VN+DKAFESPHTH SCF FLRQYA+DSFS AACLVAPKSII+YPQVW+GQG RKW+H Q DGFFVQFESPLLRKLWFI SSNE GKTLCRDPEVLDI AHEV PRLFKE
Sbjct:    6 EEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAEECWKHVFSFVVETMETAVKSWHETSKVDAKVYFLLDKEKTDTEKYAPIVNVDKAFESPHTHGSCFQFLRQYADDSFSSAACLVAPKSIISYPQVWRGQGLRKWRHSQQDGFFVQFESPLLRKLWFIPSSNEKGKTLCRDPEVLDISAHEVFPRLFKE 315          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: W9QR79_9ROSA (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Morus notabilis GN=L484_009109 PE=4 SV=1)

HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0
Identity = 263/329 (79.94%), Postives = 293/329 (89.06%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEM------SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE+E GS      E       SLK+KGNE+FKAGN+LKAAALYTQAIKQDP+NP  YSNRAAAFL LVKLNKALADAETTI L P+WEKGYFRKGCILEAMERYDDAL AFQ A+Q+NPQS EVS+KIKR++QLAK+KKRAQEV+N+RSNVD+AK L+ LK+EMSEK  SE+ WKEMFSFL+ETMETAVKSWHETS+VDPRVYFLLDKE++Q +KYAP VNIDKAFESPHTHS CFSFLRQYAEDSFSRAACLV+PKSII+YPQVWKGQG RKWKHG  DGFFVQFE+P+LR+LWFI SSNE G+TLCRDPEVLDI AHEVLPRL+KE
Sbjct:    1 MAESEAGSRTAGASEGGGGEEKSLKEKGNEYFKAGNFLKAAALYTQAIKQDPNNPAFYSNRAAAFLQLVKLNKALADAETTIALSPKWEKGYFRKGCILEAMERYDDALTAFQTAVQFNPQSVEVSKKIKRIAQLAKNKKRAQEVENMRSNVDMAKHLDKLKAEMSEKCGSEECWKEMFSFLVETMETAVKSWHETSEVDPRVYFLLDKERTQTEKYAPAVNIDKAFESPHTHSDCFSFLRQYAEDSFSRAACLVSPKSIISYPQVWKGQGLRKWKHGLQDGFFVQFETPVLRRLWFIPSSNEQGQTLCRDPEVLDITAHEVLPRLYKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP2_ARATH (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.651e-19
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y  A   YT+AIK++P +P  YSNRAA +  L  + + L DAE  I L P + KGY RKG +   M+ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  386 REKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYSRKGAVQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQ 495          

HSP 2 Score: 77.0258 bits (188), Expect = 1.737e-13
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T AI   P+N  L+SNR+AA   L   ++AL+DA+ T+ LKP W KGY R G     + ++D+A+ A+   L+ +P
Sbjct:    6 KAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDP 101          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CAEEL (Stress-induced-phosphoprotein 1 OS=Caenorhabditis elegans GN=sti-1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.215e-19
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            K+KGNE+FK G+Y  A   Y +A+K+DP N  LYSNRAA    L++  +AL D +T I L  ++ KGY RK   L AM  +  A  A++ ALQ +P + E    ++
Sbjct:  144 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVR 249          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.124e-17
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL+ +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALELDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.887e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_SOYBN (Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN=HOP1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.437e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            ++KGNE FK   Y +A   YT+AIK++P +   YSNRAA +  L  + + L DAE  I L P + KGY RKG +  +M+ YD AL  ++  L+++P + E+   I+R
Sbjct:  387 REKGNELFKQQKYPEATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRR 493          

HSP 2 Score: 83.1889 bits (204), Expect = 1.680e-15
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSA 619
            K KGN  F AG++  A   ++ AI   PSN  LYSNR+AA   L    +ALADA+ T+ LKP W K Y R G     + R+ DA +A++  LQ +P +A
Sbjct:    6 KAKGNAAFSAGDFAAAVRHFSDAIALSPSNHVLYSNRSAAHASLQNYAEALADAQKTVDLKPDWPKAYSRLGAAHLGLRRHRDAFSAYKTGLQLDPDNA 104          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_ARATH (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana GN=HOP1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.115e-17
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y +A   YT+AIK++P++   YSNRAA++  L  + + L DAE  I L P + KGY RK  +   ++ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  387 REKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELDPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQ 496          

HSP 2 Score: 73.1738 bits (178), Expect = 2.856e-12
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T+AI   P+N  L+SNR+AA   L +  +AL+DA+ TI LKP W KGY R G     + +++ A+ A++  L  +P
Sbjct:    6 KAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDP 101          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.153e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSNCKEAADGYQR 470          

HSP 2 Score: 81.6481 bits (200), Expect = 4.806e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKQTYEEGLKHEANNPQLKE 110          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.927e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.971e-14
Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+    GN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.996e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 2.096e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSRKEAADGYQR 470          

HSP 2 Score: 81.2629 bits (199), Expect = 6.307e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVELKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0N8L7_GOSAR0.000e+0100.00Heat shock STI OS=Gossypium arboreum GN=F383_06496... [more]
A0A0D2PZQ8_GOSRA0.000e+098.76Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061ELQ6_THECC0.000e+090.00Tetratricopeptide repeat (TPR)-like superfamily pr... [more]
A0A061EL78_THECC0.000e+088.39Tetratricopeptide repeat (TPR)-like superfamily pr... [more]
B9HUR9_POPTR0.000e+082.98Tetratricopeptide repeat-containing family protein... [more]
A0A067KVT9_JATCU0.000e+083.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9HK95_POPTR0.000e+082.73Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9RTL2_RICCO0.000e+084.16Heat shock protein 70 (HSP70)-interacting protein,... [more]
V4S3B3_9ROSI0.000e+084.84Uncharacterized protein OS=Citrus clementina GN=CI... [more]
W9QR79_9ROSA0.000e+079.94Small glutamine-rich tetratricopeptide repeat-cont... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HSOP2_ARATH4.651e-1941.82Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis th... [more]
STIP1_CAEEL5.215e-1942.45Stress-induced-phosphoprotein 1 OS=Caenorhabditis ... [more]
STIP1_CRIGR2.124e-1742.99Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
HSOP1_SOYBN2.437e-1741.12Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN... [more]
HSOP1_ARATH3.115e-1739.09Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis th... [more]
STIP1_BOVIN3.153e-1742.99Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S... [more]
STIP1_HUMAN3.927e-1742.99Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
STIP1_RAT3.996e-1742.99Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_MOUSE4.558e-1742.99Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]
STIP1_MACFA4.558e-1742.99Stress-induced-phosphoprotein 1 OS=Macaca fascicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 49..82
e-value: 8.1
score: 15.4
coord: 83..116
e-value: 6.8E-5
score: 32.3
coord: 15..48
e-value: 0.0071
score: 25.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 15..48
score: 9.352
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 49..82
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 9.765
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 16..144
e-value: 1.2E-33
score: 115.4
IPR011990Tetratricopeptide-like helical domainPFAMPF13414TPR_11coord: 22..60
e-value: 1.4E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 17..126
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 84..115
e-value: 8.6E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 13..193
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 252..311
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 252..311
coord: 13..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 15..116
score: 21.994

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bp
GTTTAGTTTACCCATAATTTTTTTAAGGAAAAAACCAGAGCTCACTCTTG
TAATTTTGCTTAGGGTTTTCTTTTAATCAAAACTAATCTGATTCTCCTTT
CTACTCCAAAATCACCAAAAGCCCAGATTTTGTTTAGAAATTAGAAAACT
CCATCGTTTATACCGCTGTTAAATACCTCCATAGACATCATCCCCTCAGA
AAAGTAGAAGCTTCTCTCTCCCATTAACCCTAACTACACAACAAATAAAA
TTACTTCAAAACAATAGGATGGCAGAAGCAGAGGTAGGATCTGGTGAAGG
AAAGCCCCAAGAGATGTCGTTGAAGGATAAAGGGAATGAGTTTTTCAAGG
CTGGGAACTACCTTAAAGCTGCTGCTCTTTACACTCAGGCCATTAAACAA
GACCCTTCAAATCCCACTCTTTATAGCAATCGAGCAGCAGCGTTTCTACA
TTTGGTTAAACTTAACAAAGCGCTGGCTGATGCTGAGACAACAATTACTT
TGAAACCTCAGTGGGAAAAGGGATATTTTCGAAAAGGATGCATTTTAGAG
GCTATGGAACGATATGACGATGCTTTAGCTGCCTTCCAAATAGCTTTGCA
GTACAACCCACAAAGTGCAGAAGTCTCAAGAAAAATTAAGAGACTTTCAC
AGCTTGCAAAAGATAAAAAGCGAGCTCAAGAAGTGCAAAACTTGCGATCC
AATGTAGATATAGCAAAAAGCTTGGAAACATTGAAATCTGAAATGTCTGA
AAAGTACAAATCGGAAGATAGTTGGAAAGAGATGTTTTCTTTTCTTATTG
AGACAATGGAAACAGCTGTAAAATCATGGCATGAGACTTCCAAAGTGGAT
CCTAGAGTCTACTTCCTTCTTGATAAGGAGAAGAGCCAAGCCGATAAATA
TGCTCCAGTTGTCAATATTGACAAGGCTTTTGAATCGCCTCATACGCACA
GCAGTTGTTTTTCATTTCTTAGGCAATATGCTGAAGATTCTTTCTCTAGA
GCAGCTTGTTTAGTTGCTCCTAAAAGTATCATAGCTTATCCACAGGTCTG
GAAAGGTCAGGGTTCAAGGAAGTGGAAGCATGGGCAACATGATGGTTTCT
TTGTTCAATTCGAGTCACCACTCTTGCGAAAACTATGGTTTATTTCGAGT
TCCAATGAGATGGGGAAGACACTGTGCAGGGATCCAGAGGTTCTAGATAT
AGGTGCACATGAAGTACTTCCACGCCTTTTCAAAGAAAATCTATCCAGTT
CCTCATGAGCTTTATCTTAGGCTGAAGGAAATTGCTAGGCATGCCGGTGG
ACTTTGATTGCGAGGTTTACATATGAAAAAAGGTACCAACAACATAGCGT
GCTTGCTTGTTACTTCGAGCTGTATATGAATTTCCTTTTATATGTGAAAA
CTCGCCAACTAGGTACACTTTTTCGAGTCACATAGCACTCATTTTCTTGG
TTTTGAAAAATTTTCTAAAGAAGTTTACAAGCCTTTTTTGAGTGATTACA
TTTTATGGGTGTTTGTTAAAACTGCTTTCTTGCCTTAAGTGATTCGCGGG
TTTCGGTTCTTGAGTTGGTTATATGTTGGAAGAACAGTAAAGCTAGTTGG
TGTAGAACTTATTCTCTTGTTTTCTGTTGTAATTATATGTAGAAAGTTAT
CGATAAGGGCTGATGTAGTTTTGTTTCATTTATGCATGAAGGGTTTCTTT
CTTTTAAAA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding