g.arboreum_cottongen_reftransV1_0015984, g.arboreum_cottongen_reftransV1_0015984 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015984
Unique Nameg.arboreum_cottongen_reftransV1_0015984
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length908
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr3chromosomeg.arboreum_cottongen_reftransV1_0015984:1..908 .
Chr3:9252835..9255295 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: U5GAQ8_POPTR (BZIP transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s05470g PE=4 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 1.016e-125
Identity = 215/309 (69.58%), Postives = 241/309 (77.99%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHD--LRTNNALADISSVENIQPKSEVSS-VSGNKIGRTPSMQRVASLEHLQKRICG 899
            FLK+KLN+ACAAVA+SRA FVKP  S   A+SGSQAS T   GS A SKGAG       DKD N   G PS+ + QKK+    +P+TSGSSRE+SEDDE E E E  ENM PADAKRVRRMLSNRESARRSRRRKQAHLTELETQV+QLRVEN++LLKRL D SQKYNESAVDNRVLKAD+ETLRAKV+MAE++VKR TGL+ +FHA P IS   M SFDG PSDTS +AAV V+D PKH  YQ A N PISTHD   R N  LADISSVEN+QP S  ++ VSGNK+GRT S+QRVASLE LQKRI G
Sbjct:   84 FLKSKLNMACAAVALSRAYFVKPLKSPATAESGSQASSTSHLGSHAPSKGAGHDLSRSRDKDANEPLGTPSLPSMQKKLAVSGKPTTSGSSRELSEDDENEAETEITENMHPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADTSQKYNESAVDNRVLKADIETLRAKVRMAEETVKRFTGLNHMFHAMPYISAMSMPSFDGCPSDTSADAAVPVKDDPKHHFYQ-APNNPISTHDSRPRVNFVLADISSVENVQPNSGTAAGVSGNKLGRTASLQRVASLERLQKRIRG 391          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A067JI80_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23494 PE=4 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 1.980e-121
Identity = 213/306 (69.61%), Postives = 242/306 (79.08%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICG 899
            FLK++L+LACAAVA+SRA F+K QDS  RADSGSQAS+T QSGS    KGAG       D D N   G  S    QKK G  ++ +TSGSSRE SEDDE EGE E M   DPADAKRVRRMLSNRESARRSRRRKQAHLTELETQV+QLRVEN++LLKRL+DIS KYN+++VDNRVLKADVETLRAKVKMAE++VKRITGL+P+ H+ PEIST  M SFDGSPSDT T+AAV +QD PK  LYQ   N P+ST D R NN L +ISS ENIQP S  + ++GNKIGRT S+QRVASLEHLQKRICG
Sbjct:  128 FLKSQLSLACAAVALSRAPFLKSQDSPARADSGSQASNTSQSGS-HVPKGAGNDLSRPQDTDANGLVGIHSST--QKKSGVPMKSTTSGSSREQSEDDENEGETE-MNMKDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEETVKRITGLNPLSHSMPEISTISMPSFDGSPSDTLTDAAVPIQDEPKR-LYQ-LPNNPLSTRDPRVNNGLTNISSAENIQPPSGTAGLAGNKIGRTASLQRVASLEHLQKRICG 427          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: V4T471_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001051mg PE=4 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 6.215e-118
Identity = 213/308 (69.16%), Postives = 246/308 (79.87%), Query Frame = 3
Query:    6 LKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGD------KDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKS-EVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            LK+KLNLACAAVA+SRAS  +PQD+A RADSGSQ+S+T Q GS A      D      KD N   G PS+    KK    VR +TSGSSR++SEDDE EGE  T ENMDP DAKRVRRMLSNRESARRSRRRKQAH+TELETQVSQLRVEN++LLKRLTDISQKYNE+AVDNRVLKADVETLRAKVKMAE++VKRITGL+P+   SPE+S+  MSSF GS SDTS +A V +QD PKH  +Q  ++ P+S+HDLR NNA +DISSVEN+QP +   ++ SGNKIGRT SMQRVASLEHLQKRI GG+S
Sbjct:  151 LKSKLNLACAAVALSRASCARPQDTADRADSGSQSSNTSQLGSQAPKGPVHDLSRSQNKDVNGLHGIPSISTTLKKPLVPVRSATSGSSRDLSEDDEAEGETATTENMDPVDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPLLQGSPEMSSMSMSSFGGSHSDTSADATVPLQDDPKHHFFQPPSDNPVSSHDLRVNNAFSDISSVENVQPNAGATAAASGNKIGRTVSMQRVASLEHLQKRIRGGVS 458          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: P93839_SOYBN (G/HBF-1 OS=Glycine max GN=G/HBF-1 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.481e-117
Identity = 198/310 (63.87%), Postives = 234/310 (75.48%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRA-DSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++L+LACAAVA++R   + PQDS   A D GS+ +   QSGS  ++ G+G       DKD     G PS+   QKK   QVR +TSGSSRE S+DDE EGE ET + MDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVEN++LLKRLTDISQKYNE+AVDNRVLKADVETLR KVKMAE++VKR+TGL+P+F A  EIS+  M S+ GSPSDTS +AAV VQD PKH  YQ   N  + THD R  N + D+  +EN++     ++V GNK+GRT SMQRVASLEHLQKRI G +S
Sbjct:   59 FLKSQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTLGSGQEVAKIQDKDAGGPVGIPSLPPVQKKPVVQVRSTTSGSSREQSDDDEAEGEAETTQGMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRTKVKMAEETVKRVTGLNPLFQAMSEISSMVMPSYSGSPSDTSADAAVPVQDDPKHHYYQQPPNNLMPTHDPRIQNGMVDVPPIENVEQNPATAAVGGNKMGRTTSMQRVASLEHLQKRIRGEVS 368          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: M5VZ41_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005585mg PE=4 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 7.061e-117
Identity = 206/311 (66.24%), Postives = 237/311 (76.21%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSR--ASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVS--GNKIGRTPSMQRVASLEHLQKRICGG 902
            FLK KLNLACAAVA+SR   S V  QDSAV A SGSQAS+T   GS A SKGAG       DK+ NA  G PS+   Q +    VR +TSGSSRE+S+D+++EGE    EN+DPAD KRVRRMLSNRESARRSRRRKQAHL+ELE Q SQLRVEN++LLKRLTD  +KYNE+AVDNRVLKAD+ETLRAKVKMAE++VKRITGL+ +FHA  EIS+ GM  FDGSPS+TST+AAV VQD P H   Q A+N P  THDLR  +  ADI SVEN+Q  S  +S    GNK+GRTPS+ RVASLEHLQKRI GG
Sbjct:  133 FLKTKLNLACAAVALSRVKGSLVDSQDSAVLAGSGSQASNTSHLGSQAPSKGAGYDLSRPHDKNANAPVGIPSLPATQHRSVVPVRQATSGSSRELSDDEDIEGETAITENVDPADVKRVRRMLSNRESARRSRRRKQAHLSELEAQASQLRVENSSLLKRLTDADRKYNEAAVDNRVLKADIETLRAKVKMAEETVKRITGLN-MFHAVSEISSIGMPPFDGSPSETSTDAAVPVQDDPNHHFCQPASNSPTPTHDLRVKHDSADIPSVENVQQNSAATSADAVGNKMGRTPSLHRVASLEHLQKRIRGG 442          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: B2DBE7_SOYBN (BZIP protein OS=Glycine max GN=SBZ1 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 1.902e-116
Identity = 200/311 (64.31%), Postives = 236/311 (75.88%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGA----------GDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDG-SPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGG 902
            FLK+KLNLACAAVAM+R S  K QD +  +D GSQ ++    GS  TSKG+           DKD NA  G PS+   QKK    +RPSTSGSSRE S+D+++EGE    +N DPAD KRVRRMLSNRESARRSRRRKQAHLT+LETQVSQLR EN+TLLKRLTD+SQKY++SAVDNRVLKADVETLRAKVKMAE++VKRITGL+P+ HA  +IS+ G+ SFDG SPSDTS +A+V VQD P H  YQ   N PI +HD   NN L  ISS+EN+Q ++  + V GNKIG+T S+QRVASLEHLQKRI GG
Sbjct:  102 FLKSKLNLACAAVAMTRGSLAKSQDPSPFSDGGSQPTNPSLVGSQTTSKGSIPSGNDQSKLQDKDINAPVGIPSIPAIQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMPHAMSDISSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIPSHDPIVNNGLGGISSIENVQQQNAAAVVGGNKIGQTASLQRVASLEHLQKRIRGG 412          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: Q93YM7_TOBAC (BZIP transcription factor OS=Nicotiana tabacum GN=BZI-1 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.748e-116
Identity = 198/310 (63.87%), Postives = 234/310 (75.48%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRA-DSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++L+LACAAVA++R   + PQDS   A D GS+ +   QSGS  ++ G+G       DKD     G PS+   QKK   QVR +TSGSSRE S+DDE EGE ET + MDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVEN++LLKRLTDISQKYNE+AVDNRVLKADVETLR KVKMAE++VKR+TGL+P+F A  EIS+  M S+ GSPSDTS +AAV VQD PKH  YQ   N  + THD R  N + D+  +EN++     ++V GNK+GRT SMQRVASLEHLQKRI G +S
Sbjct:  131 FLKSQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTLGSGQEVAKIQDKDAGGPVGIPSLPPVQKKPVVQVRSTTSGSSREQSDDDEAEGEAETTQGMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRTKVKMAEETVKRVTGLNPLFQAMSEISSMVMPSYSGSPSDTSADAAVPVQDDPKHHYYQQPPNNLMPTHDPRIQNGMVDVPPIENVEQNPATAAVGGNKMGRTTSMQRVASLEHLQKRIRGEVS 440          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: K4B0C0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g097330.2 PE=4 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 1.634e-114
Identity = 196/310 (63.23%), Postives = 234/310 (75.48%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQD-SAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++L+LACAAVA++RA  +KPQD S++  D G + +   QS S  TSKG+G       DKD     G PS+   QKK G QV+ +TSGSSRE+S+DDE EGE ET +  DPAD KRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVEN++LLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+F A  E+S+  M SF GSPSDTST+ AV V D  +H  YQ   N  + THD R  N + D+ ++  +Q     ++V GNK+GRT SMQRVASLEHLQKRI G +S
Sbjct:  135 FLKSRLDLACAAVALTRAKNLKPQDASSIAPDKGPETASASQSVSHITSKGSGQEVRKVQDKDSGGPVGIPSLPAVQKKPGVQVKSTTSGSSRELSDDDEAEGEAETTQGTDPADTKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQAMSEMSSMAMPSFSGSPSDTSTDTAVPVPDDSQHHYYQQPPNNHMPTHDPRIQNGMVDVPTIGTVQQNPAAAAVGGNKMGRTASMQRVASLEHLQKRIRGEVS 444          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: M1BPR9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019455 PE=4 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 2.652e-113
Identity = 195/311 (62.70%), Postives = 236/311 (75.88%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSA-VRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSV-ENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLKN+L+LACAAVA++RA  +KPQDS+ +  D G + +   QS S  ++KG+G       DKD     G PS+ + QKK   QV+ +TSGSSRE+S+DDE EGE ET +  DPAD KRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVEN++LLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+F A  E+S+  M SF GSPSDTST+ A+ VQD P+H  YQ   N  + THD R  N + D+  +  ++Q     ++V GNK+GRT SMQRVASLEHLQKRI G +S
Sbjct:  131 FLKNRLDLACAAVALTRAKNLKPQDSSSIAPDKGPETASASQSVSHISTKGSGQEVRKVQDKDSGGPVGIPSLPSVQKKPVVQVKSTTSGSSRELSDDDEAEGEAETTQGTDPADTKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQAMSEMSSMAMPSFSGSPSDTSTDTALPVQDDPQHHYYQQPPNNHMPTHDPRIQNGMVDVPPIGGSVQQNLAAAAVGGNKMGRTASMQRVASLEHLQKRIRGEVS 441          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: V7BJR6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G187400g PE=4 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 5.833e-112
Identity = 201/312 (64.42%), Postives = 235/312 (75.32%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGA----------GDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDG-SPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGI 905
            FLK+KLNLACAAVAM+RAS  K Q+     D GSQ  D  Q GS  TSK +           DKD N   G PS+ + QKK    VRPSTSGSSRE+S+D++ EGE  +M +MDPADAKRVRRMLSNRESARRSRRRKQAHLT+LETQVSQLR EN+TLLKRLTD+SQKY+ESAVDNRVLKADVETLRAKVKMAE++VKRITGL+P+ HA  ++S+ GM  FDG SPSDTS +AAV VQD   H  YQ  +N PI  HD   N+ L  ISS+EN+Q ++    V GNK+G+T S+QRVASLEHLQKRI GG+
Sbjct:  134 FLKSKLNLACAAVAMTRASLAKSQEPIPFVDGGSQPIDPSQVGSQTTSKASIPSGNDPSNLQDKDTNVPVGMPSIPSMQKKPVVAVRPSTSGSSRELSDDEDAEGET-SMNDMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMVHAMADMSSLGMPLFDGRSPSDTSADAAVPVQDD-HHQFYQPTSNNPIPNHDPIVNDGLGGISSIENVQ-QNSTEVVGGNKMGQTTSLQRVASLEHLQKRIRGGV 442          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 4.374e-101
Identity = 191/311 (61.41%), Postives = 233/311 (74.92%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDD-EVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHA-SPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            +LK++L+LACAAVA++RAS +KPQDSA   D+GSQAS+T Q  S    KG+G       DK+  A +  P +   QKK   QV+ +TSGSSR+ S+DD E+EGE ET  N DP+DAKRVRRMLSNRESARRSRRRKQAH+TELETQVSQLRVEN++LLKRLTDISQ+YN++AVDNRVLKAD+ET+RAKVKMAE++VKR+TGL+P+F + S EIST GM SF GSPSDTS +   + QDG K   YQ A    +   D +  N L  +  V+N+Q  S    V GNK+ RT SMQRVASLEHLQKRI GG+S
Sbjct:   84 YLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSAD---TTQDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVS 391          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.068e-61
Identity = 142/298 (47.65%), Postives = 192/298 (64.43%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEI-STAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRI 893
            FLK+KLNLACAAVAM R +F+KPQD++ R+D+G   ++  +  S+A+SK        A     S +             TSGS  E+S D+E E + ET  NM+P + KRV+RMLSNRESARRSRRRKQAHL+ELETQVSQLRVEN+ L+K LTD++Q +N+++V+NRVLKA++ETLRAKVKMAE++VKR+TG +P+FH  P+I ST  +      PS+TS                    N P +T         + +++ E I   ++  ++ G K+ RT SM+RV SLEHLQKRI
Sbjct:   73 FLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSK--------ATPMMSSAI-------------TSGS--ELSGDEE-EADGET--NMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL------PSETS--------------------NSPDTTS--------SQVTTPEIISSGNKGKALIGCKMNRTASMRRVESLEHLQKRI 308          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.885e-35
Identity = 107/223 (47.98%), Postives = 145/223 (65.02%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIA--TSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTST 665
             LK+KL LACAAVA  R   VKP+DS+  A +  QA      GSI   TS GA      +   F    + QKK     R  TS SSR+ S+DD+++G+ +  +   P D KR RRMLSNRESARRSRRRKQ  + E +TQV QLR E++TL+ RL+D++ KY+ +AVDNR+L+AD+ETLR KVKMAE++VKR+TG++P+  + P +       F  +PS +S+
Sbjct:  137 ILKSKLELACAAVA-RRVGTVKPEDSSASASNQKQAQ-----GSIVAQTSPGA------SSVRFSPTTSTQKKPDVPAR-QTSISSRDDSDDDDLDGDADNGD---PTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 9.698e-35
Identity = 98/197 (49.75%), Postives = 134/197 (68.02%), Query Frame = 3
Query:    6 LKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVF 596
            LKNKL   CA V   R   VKP+DS    ++  Q    P   S  T    G       S  P+ V   KK G  ++  TSGSSRE S+D++++ ENET  ++ P D K+ RRMLSNRESARRSRRRKQ   ++LETQV+ L+ E+++LLK+L++++ KY+E+AV NR+LKAD+ETLRAKVKMAE++VKR+TG++P+ 
Sbjct:  122 LKNKLETECATVVSLRVGSVKPEDSTSSPETQLQ----PVQSSPLTQGELG-----VTSSLPAEV---KKTGVSMKQVTSGSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.139e-22
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDE-VEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRI 575
             L+ KL     A  M RA       S V +D  SQ S+    GS   +    +K  N +   P   N  +  G  VR +TS SSR+ S  DE ++GE E +    P + +RVR+  SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+R+  ++QKYN++ VDNRVL+AD+ETLRAKVKM EDS+KR+
Sbjct:  126 ILRRKLEEDLEAFKMWRAD-----SSVVTSDQRSQGSNNHTGGSSIRNNPVQNKLMNGED--PINNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGFKMPTE-ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKMGEDSLKRV 309          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.380e-22
Identity = 74/149 (49.66%), Postives = 96/149 (64.43%), Query Frame = 3
Query:  228 VRPSTSGSSREMSEDDEVEGE--NETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKR-----------ITGLSPVFHASPEISTAGMSS 635
            VR +TSGSS   S+D++ E E     M N DP D KR+RRM SNRESA+RSRRRKQ +L +LETQV  L+ +N+TL K+L D +Q++  +  +NRVLK+DVETLR KVK+AED V R            T LSP  H+   +   G +S
Sbjct:   88 VRRTTSGSSHVNSDDEDAETEAGQSEMTN-DPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSLHYTGNTS 235          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
U5GAQ8_POPTR1.016e-12569.58BZIP transcription factor family protein OS=Populu... [more]
A0A067JI80_JATCU1.980e-12169.61Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4T471_9ROSI6.215e-11869.16Uncharacterized protein OS=Citrus clementina GN=CI... [more]
P93839_SOYBN2.481e-11763.87G/HBF-1 OS=Glycine max GN=G/HBF-1 PE=2 SV=1[more]
M5VZ41_PRUPE7.061e-11766.24Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B2DBE7_SOYBN1.902e-11664.31BZIP protein OS=Glycine max GN=SBZ1 PE=2 SV=1[more]
Q93YM7_TOBAC2.748e-11663.87BZIP transcription factor OS=Nicotiana tabacum GN=... [more]
K4B0C0_SOLLC1.634e-11463.23Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M1BPR9_SOLTU2.652e-11362.70Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
V7BJR6_PHAVU5.833e-11264.42Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CPRF2_PETCR4.374e-10161.41Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
BZP63_ARATH1.068e-6147.65Basic leucine zipper 63 OS=Arabidopsis thaliana GN... [more]
BZP25_ARATH2.885e-3547.98Basic leucine zipper 25 OS=Arabidopsis thaliana GN... [more]
BZP10_ARATH9.698e-3549.75Basic leucine zipper 10 OS=Arabidopsis thaliana GN... [more]
OP2_MAIZE1.139e-2246.88Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
BZIP9_ARATH1.380e-2249.66Basic leucine zipper 9 OS=Arabidopsis thaliana GN=... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availableCOILSCoilCoilcoord: 111..145
NoneNo IPR availableGENE3D1.20.5.170coord: 102..154
e-value: 7.9E-13
score: 47.8
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 4..224
NoneNo IPR availablePANTHERPTHR22952:SF90BASIC LEUCINE ZIPPER 63coord: 4..224
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..23
score: 0.465
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 102..152
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 98..162
e-value: 9.0E-19
score: 78.4
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 101..154
e-value: 5.3E-14
score: 51.9
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 105..120
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 100..155
score: 11.588
IPR020983Basic leucine-zipper, C-terminalPFAMPF12498bZIP_Ccoord: 169..294
e-value: 1.3E-39
score: 135.8

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015984 ID=g.arboreum_cottongen_reftransV1_0015984; Name=g.arboreum_cottongen_reftransV1_0015984; organism=Gossypium arboreum; type=contig; length=908bp
CTTTTCTTAAGAACAAGCTTAACTTGGCTTGTGCTGCTGTTGCCATGTCA
AGGGCATCTTTTGTAAAACCGCAAGATTCGGCTGTTAGAGCTGACAGCGG
ATCACAGGCATCCGATACTCCCCAATCGGGATCCATAGCTACTTCTAAAG
GGGCTGGTGATAAGGACGGTAATGCACAGTCGGGATTTCCTTCAGTGGTT
AATGGACAAAAGAAGATTGGAGCTCAGGTGAGGCCAAGCACAAGTGGATC
ATCAAGAGAGATGTCGGAAGATGATGAAGTAGAAGGAGAGAACGAAACAA
TGGAGAACATGGATCCAGCTGATGCAAAACGTGTAAGGAGGATGCTTTCC
AATAGAGAGTCCGCTAGGCGCTCTAGAAGAAGAAAGCAGGCTCATTTGAC
GGAACTCGAGACACAGGTTTCTCAACTAAGAGTCGAAAATGCAACCTTAT
TGAAGCGTCTTACTGACATTAGCCAAAAGTACAATGAATCAGCGGTCGAC
AATAGAGTTCTGAAAGCTGATGTTGAAACATTGAGAGCAAAGGTGAAAAT
GGCTGAAGATTCCGTCAAAAGAATAACCGGTTTGAGCCCTGTGTTCCATG
CCTCACCCGAAATATCGACAGCGGGGATGTCATCATTCGATGGAAGTCCC
TCCGATACATCTACCGAAGCTGCTGTTTCCGTACAAGACGGCCCAAAGCA
TCCCTTATATCAGGCTGCTGCAAACAAACCTATATCTACTCATGACCTGA
GAACCAATAACGCGCTTGCGGATATATCTTCAGTCGAAAACATACAACCG
AAGTCAGAAGTATCATCAGTATCAGGAAACAAAATCGGTCGGACACCTTC
TATGCAGCGAGTGGCTAGCTTGGAGCATCTGCAAAAGCGGATATGCGGGG
GCATAAGC
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR020983Basic_leucine-zipper_C
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription