g.arboreum_cottongen_reftransV1_0015984, g.arboreum_cottongen_reftransV1_0015984 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015984
Unique Nameg.arboreum_cottongen_reftransV1_0015984
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length908
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr3chromosomeg.arboreum_cottongen_reftransV1_0015984:1..908 .
Chr3:9252835..9255295 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0B0NCG2_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_14363 PE=4 SV=1)

HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0
Identity = 301/302 (99.67%), Postives = 302/302 (100.00%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKR+CGGIS
Sbjct:  102 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRMCGGIS 403          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0D2R3Q8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 297/302 (98.34%), Postives = 298/302 (98.68%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQS SIATSKGAGDK+GNA SGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFH SPEISTAGMSSFDGSPSDTSTEAA SVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS
Sbjct:  102 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSVSIATSKGAGDKNGNALSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHTSPEISTAGMSSFDGSPSDTSTEAAASVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 403          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A061F207_THECC (Light-inducible protein CPRF-2, putative OS=Theobroma cacao GN=TCM_026349 PE=4 SV=1)

HSP 1 Score: 453.751 bits (1166), Expect = 1.278e-155
Identity = 251/302 (83.11%), Postives = 271/302 (89.74%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK KLNLACAAVAMSRASF+K QDSA RADSGSQAS++PQ GS ATSKGAG+KDGNA    PS+ NGQKK  AQVRPSTSGSSRE+SE+DEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQV QLRVENA+L+KRL DISQKYNE+AVDNRVLKADVETLRAKVKMAE++VKRITGL+P+ H SPEIST  MSSFDGSPSDTST+AAV VQDGPKHPLY+AAAN PI  HDLR +NALADISS ENIQP S  S+V GNKIG T S+QRVASLEHLQKRI GG+S
Sbjct:  102 FLKTKLNLACAAVAMSRASFLKSQDSAARADSGSQASNSPQLGSKATSKGAGNKDGNAPVEIPSLPNGQKKSVAQVRPSTSGSSRELSEEDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVGQLRVENASLMKRLADISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPLLHGSPEISTMAMSSFDGSPSDTSTDAAVPVQDGPKHPLYRAAANNPIFAHDLRVSNALADISSAENIQPNSGGSTVPGNKIGWTASLQRVASLEHLQKRIRGGVS 403          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0D2PFQ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.449e-152
Identity = 240/303 (79.21%), Postives = 265/303 (87.46%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK KLNLACAAVAMS ASF KPQDSA RADSG QAS+TPQ GS   S+GAGDKD NA +  PS  +GQKK+ AQVRPSTS GSS+E S++DEVEGENETMENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMA ++VKR TGL+PVFHA PEI +  MSSFDG PSDTST+AAV  +DGPKH LYQAAAN  ISTH+LR NNALADISSVENIQP SE S+V+GNKIGRT S+QRVASLEHLQKRI GG+S
Sbjct:  104 FLKKKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPS--MSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVS 404          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0D2R0F6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 2.235e-151
Identity = 239/304 (78.62%), Postives = 265/304 (87.17%), Query Frame = 3
Query:    3 FLKN-KLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FL+  KLNLACAAVAMS ASF KPQDSA RADSG QAS+TPQ GS   S+GAGDKD NA +  PS  +GQKK+ AQVRPSTS GSS+E S++DEVEGENETMENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMA ++VKR TGL+PVFHA PEI +  MSSFDG PSDTST+AAV  +DGPKH LYQAAAN  ISTH+LR NNALADISSVENIQP SE S+V+GNKIGRT S+QRVASLEHLQKRI GG+S
Sbjct:   47 FLREEKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPS--MSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVS 348          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0B0P269_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_23731 PE=4 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 2.603e-149
Identity = 237/303 (78.22%), Postives = 261/303 (86.14%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK KLNLACAAVAMS ASF KPQDSA RAD GSQAS+TPQ GS   S+G GDKD NA +   S  +GQKK  AQVRPSTS GSS+E S++DEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAE++VKR TGL+PVFHA PEI +  MSSFDG PS+TST+AAV  +DGPKH LYQAAAN  ISTHDLR NNALADISSVENIQP SE S+V+GNKIGRT S+ RVASLEHLQKRI GG+S
Sbjct:   85 FLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSDEDEVEGENETTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAEEAVKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS 385          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: B9SZ77_RICCO (Light-inducible protein CPRF-2, putative OS=Ricinus communis GN=RCOM_0484650 PE=4 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.392e-134
Identity = 222/309 (71.84%), Postives = 250/309 (80.91%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG---------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGG 902
            FLK+KLNLACAAVA SRASF+KP+DS+ RADSG QAS+T Q GS A SKGAG         D DG+   G PS+ +  KK    ++P+TSGSSRE S+DDE EGE E  ENMDP DAKRVRRMLSNRESARRSRRRKQAHLTELETQV+QLRVEN++LLKRLTDIS KYNESAVDNRVLKADVETLRAKVKMAE++VKRITGL+ +FH  PE+ST  M SFDGSPSDTST+AAV VQD  +H  YQ   N P+STHD R NNALADISSVEN+QP S  + + GNK+GRT S+QRVASLEHLQKRI GG
Sbjct:  135 FLKSKLNLACAAVAQSRASFLKPEDSSARADSGLQASNTSQLGSHAPSKGAGHDVFRSQEVDVDGSV--GIPSLPSTHKKSVVPLKPTTSGSSREQSDDDENEGETELTENMDPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLTDISHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNSLFHTIPEMSTMSMPSFDGSPSDTSTDAAVPVQDDTEHQFYQ-PPNNPLSTHDPRVNNALADISSVENVQPHSGAAGLGGNKMGRTASLQRVASLEHLQKRIRGG 440          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: B9I5F3_POPTR (BZIP transcription factor family protein OS=Populus trichocarpa GN=POPTR_0013s03800g PE=4 SV=2)

HSP 1 Score: 392.889 bits (1008), Expect = 5.250e-132
Identity = 223/312 (71.47%), Postives = 251/312 (80.45%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRT--NNALADISSVENIQPKS-EVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK+KLNLACAAVA++RASFVKP DS   A+SGSQAS+T Q GS A SKGAG       DKD N   G PS+ + Q+K    V+P+TS SSRE+SEDDE E E E  ENM PADAKRVRRMLSNRESARRSR RKQAHLTELETQV+QLRVEN++LLK LTDISQKYNESAVDNRVLKADVETLRAKVKMAE++VKR TGL+ +FHA P+IST  MSSFDGSPSDT+ +AAV V+D PKH  Y+ A N PI+THD R   NN LADISSVEN+QP     + VSGNK+GRTPS+QRVASLEHLQKRI GG S
Sbjct:   78 FLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQLGSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSVSSRELSEDDENEAETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRFTGLNTMFHALPDISTMSMSSFDGSPSDTA-DAAVPVKDDPKHHFYK-APNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGVSGNKMGRTPSLQRVASLEHLQKRIRGGAS 387          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: F6HTR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02200 PE=4 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 1.217e-130
Identity = 216/309 (69.90%), Postives = 250/309 (80.91%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++LNLACAAVA+SRASFVKPQDSA  AD+GSQAS T Q  S A  KG+G       DK+     G PS+   QKK GAQ+RP+TS SSRE S+DDEVEGE ET+ENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQV+QLR+EN++LLKRLTDISQKYNE+AVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+F    EIS AGM SFDGSPSDTS +AAV VQD PK   Y + ++  ISTHD R NN LAD+SSVE++      +  +GNK+GRT S+QRVASLEHLQKRI G ++
Sbjct:  106 FLKSRLNLACAAVALSRASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSESSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAVN 414          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A5BP13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022136 PE=4 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 3.116e-126
Identity = 216/326 (66.26%), Postives = 250/326 (76.69%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSR-----------------ASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++LNLACAAVA+SR                 ASFVKPQDSA  AD+GSQAS T Q  S A  KG+G       DK+     G PS+   QKK GAQ+RP+TS SSRE S+DDEVEGE ET+ENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQV+QLR+EN++LLKRLTDISQKYNE+AVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+F    EIS AGM SFDGSPSDTS +AAV VQD PK   Y + ++  ISTHD R NN LAD+SSVE++      +  +GNK+GRT S+QRVASLEHLQKRI G ++
Sbjct:  104 FLKSRLNLACAAVALSRVTVDQLPLPLHKLQIIQASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSESSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAVN 429          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 4.374e-101
Identity = 191/311 (61.41%), Postives = 233/311 (74.92%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDD-EVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHA-SPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            +LK++L+LACAAVA++RAS +KPQDSA   D+GSQAS+T Q  S    KG+G       DK+  A +  P +   QKK   QV+ +TSGSSR+ S+DD E+EGE ET  N DP+DAKRVRRMLSNRESARRSRRRKQAH+TELETQVSQLRVEN++LLKRLTDISQ+YN++AVDNRVLKAD+ET+RAKVKMAE++VKR+TGL+P+F + S EIST GM SF GSPSDTS +   + QDG K   YQ A    +   D +  N L  +  V+N+Q  S    V GNK+ RT SMQRVASLEHLQKRI GG+S
Sbjct:   84 YLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSAD---TTQDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVS 391          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.068e-61
Identity = 142/298 (47.65%), Postives = 192/298 (64.43%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEI-STAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRI 893
            FLK+KLNLACAAVAM R +F+KPQD++ R+D+G   ++  +  S+A+SK        A     S +             TSGS  E+S D+E E + ET  NM+P + KRV+RMLSNRESARRSRRRKQAHL+ELETQVSQLRVEN+ L+K LTD++Q +N+++V+NRVLKA++ETLRAKVKMAE++VKR+TG +P+FH  P+I ST  +      PS+TS                    N P +T         + +++ E I   ++  ++ G K+ RT SM+RV SLEHLQKRI
Sbjct:   73 FLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSK--------ATPMMSSAI-------------TSGS--ELSGDEE-EADGET--NMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL------PSETS--------------------NSPDTTS--------SQVTTPEIISSGNKGKALIGCKMNRTASMRRVESLEHLQKRI 308          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.885e-35
Identity = 107/223 (47.98%), Postives = 145/223 (65.02%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIA--TSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTST 665
             LK+KL LACAAVA  R   VKP+DS+  A +  QA      GSI   TS GA      +   F    + QKK     R  TS SSR+ S+DD+++G+ +  +   P D KR RRMLSNRESARRSRRRKQ  + E +TQV QLR E++TL+ RL+D++ KY+ +AVDNR+L+AD+ETLR KVKMAE++VKR+TG++P+  + P +       F  +PS +S+
Sbjct:  137 ILKSKLELACAAVA-RRVGTVKPEDSSASASNQKQAQ-----GSIVAQTSPGA------SSVRFSPTTSTQKKPDVPAR-QTSISSRDDSDDDDLDGDADNGD---PTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 9.698e-35
Identity = 98/197 (49.75%), Postives = 134/197 (68.02%), Query Frame = 3
Query:    6 LKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVF 596
            LKNKL   CA V   R   VKP+DS    ++  Q    P   S  T    G       S  P+ V   KK G  ++  TSGSSRE S+D++++ ENET  ++ P D K+ RRMLSNRESARRSRRRKQ   ++LETQV+ L+ E+++LLK+L++++ KY+E+AV NR+LKAD+ETLRAKVKMAE++VKR+TG++P+ 
Sbjct:  122 LKNKLETECATVVSLRVGSVKPEDSTSSPETQLQ----PVQSSPLTQGELG-----VTSSLPAEV---KKTGVSMKQVTSGSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.139e-22
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDE-VEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRI 575
             L+ KL     A  M RA       S V +D  SQ S+    GS   +    +K  N +   P   N  +  G  VR +TS SSR+ S  DE ++GE E +    P + +RVR+  SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+R+  ++QKYN++ VDNRVL+AD+ETLRAKVKM EDS+KR+
Sbjct:  126 ILRRKLEEDLEAFKMWRAD-----SSVVTSDQRSQGSNNHTGGSSIRNNPVQNKLMNGED--PINNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGFKMPTE-ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKMGEDSLKRV 309          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.380e-22
Identity = 74/149 (49.66%), Postives = 96/149 (64.43%), Query Frame = 3
Query:  228 VRPSTSGSSREMSEDDEVEGE--NETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKR-----------ITGLSPVFHASPEISTAGMSS 635
            VR +TSGSS   S+D++ E E     M N DP D KR+RRM SNRESA+RSRRRKQ +L +LETQV  L+ +N+TL K+L D +Q++  +  +NRVLK+DVETLR KVK+AED V R            T LSP  H+   +   G +S
Sbjct:   88 VRRTTSGSSHVNSDDEDAETEAGQSEMTN-DPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSLHYTGNTS 235          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NCG2_GOSAR0.000e+099.67Light-inducible CPRF2 OS=Gossypium arboreum GN=F38... [more]
A0A0D2R3Q8_GOSRA0.000e+098.34Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061F207_THECC1.278e-15583.11Light-inducible protein CPRF-2, putative OS=Theobr... [more]
A0A0D2PFQ0_GOSRA1.449e-15279.21Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2R0F6_GOSRA2.235e-15178.62Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0P269_GOSAR2.603e-14978.22Light-inducible CPRF2 OS=Gossypium arboreum GN=F38... [more]
B9SZ77_RICCO5.392e-13471.84Light-inducible protein CPRF-2, putative OS=Ricinu... [more]
B9I5F3_POPTR5.250e-13271.47BZIP transcription factor family protein OS=Populu... [more]
F6HTR1_VITVI1.217e-13069.90Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BP13_VITVI3.116e-12666.26Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CPRF2_PETCR4.374e-10161.41Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
BZP63_ARATH1.068e-6147.65Basic leucine zipper 63 OS=Arabidopsis thaliana GN... [more]
BZP25_ARATH2.885e-3547.98Basic leucine zipper 25 OS=Arabidopsis thaliana GN... [more]
BZP10_ARATH9.698e-3549.75Basic leucine zipper 10 OS=Arabidopsis thaliana GN... [more]
OP2_MAIZE1.139e-2246.88Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
BZIP9_ARATH1.380e-2249.66Basic leucine zipper 9 OS=Arabidopsis thaliana GN=... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availableCOILSCoilCoilcoord: 111..145
NoneNo IPR availableGENE3D1.20.5.170coord: 102..154
e-value: 7.9E-13
score: 47.8
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 4..224
NoneNo IPR availablePANTHERPTHR22952:SF90BASIC LEUCINE ZIPPER 63coord: 4..224
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..23
score: 0.465
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 102..152
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 98..162
e-value: 9.0E-19
score: 78.4
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 101..154
e-value: 5.3E-14
score: 51.9
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 105..120
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 100..155
score: 11.588
IPR020983Basic leucine-zipper, C-terminalPFAMPF12498bZIP_Ccoord: 169..294
e-value: 1.3E-39
score: 135.8

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015984 ID=g.arboreum_cottongen_reftransV1_0015984; Name=g.arboreum_cottongen_reftransV1_0015984; organism=Gossypium arboreum; type=contig; length=908bp
CTTTTCTTAAGAACAAGCTTAACTTGGCTTGTGCTGCTGTTGCCATGTCA
AGGGCATCTTTTGTAAAACCGCAAGATTCGGCTGTTAGAGCTGACAGCGG
ATCACAGGCATCCGATACTCCCCAATCGGGATCCATAGCTACTTCTAAAG
GGGCTGGTGATAAGGACGGTAATGCACAGTCGGGATTTCCTTCAGTGGTT
AATGGACAAAAGAAGATTGGAGCTCAGGTGAGGCCAAGCACAAGTGGATC
ATCAAGAGAGATGTCGGAAGATGATGAAGTAGAAGGAGAGAACGAAACAA
TGGAGAACATGGATCCAGCTGATGCAAAACGTGTAAGGAGGATGCTTTCC
AATAGAGAGTCCGCTAGGCGCTCTAGAAGAAGAAAGCAGGCTCATTTGAC
GGAACTCGAGACACAGGTTTCTCAACTAAGAGTCGAAAATGCAACCTTAT
TGAAGCGTCTTACTGACATTAGCCAAAAGTACAATGAATCAGCGGTCGAC
AATAGAGTTCTGAAAGCTGATGTTGAAACATTGAGAGCAAAGGTGAAAAT
GGCTGAAGATTCCGTCAAAAGAATAACCGGTTTGAGCCCTGTGTTCCATG
CCTCACCCGAAATATCGACAGCGGGGATGTCATCATTCGATGGAAGTCCC
TCCGATACATCTACCGAAGCTGCTGTTTCCGTACAAGACGGCCCAAAGCA
TCCCTTATATCAGGCTGCTGCAAACAAACCTATATCTACTCATGACCTGA
GAACCAATAACGCGCTTGCGGATATATCTTCAGTCGAAAACATACAACCG
AAGTCAGAAGTATCATCAGTATCAGGAAACAAAATCGGTCGGACACCTTC
TATGCAGCGAGTGGCTAGCTTGGAGCATCTGCAAAAGCGGATATGCGGGG
GCATAAGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR020983Basic_leucine-zipper_C
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription