g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F6MF11_GOSHI (Somatic embryogenesis receptor-like kinase 3 protein OS=Gossypium hirsutum GN=serk3 PE=2 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 1.492e-123 Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = -3 Query: 3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614 MKENMTQRLISFCLWLIFV DLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN Sbjct: 1 MKENMTQRLISFCLWLIFVFDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2NGT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G218200 PE=4 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 9.093e-120 Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = -3 Query: 3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614 MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN Sbjct: 1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F5BZU9_GOSHI (Somatic embryogenesis receptor-like kinase 2 protein OS=Gossypium hirsutum GN=SERK2 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 1.476e-119 Identity = 198/204 (97.06%), Postives = 200/204 (98.04%), Query Frame = -3 Query: 3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614 MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGL+GDVPVNGSFSLFTPISFANNKLNN Sbjct: 1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLIGDVPVNGSFSLFTPISFANNKLNN 204
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A061E3D3_THECC (BRI1-associated receptor kinase OS=Theobroma cacao GN=TCM_007534 PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 1.217e-97 Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = -3 Query: 3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602 M +RLIS LWLI VLDLAFRVAGNAEGDALNALKTN+ DPNNVLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG L NLQYLELYSNNI+G IP+ELGNLT LVSLDLYLN L G IPTTLG+L +LRFLRLNNNSL+G IP SLTT+++LQVLDLSNN LVGDVPVNGSFSLFTPISFANN+LNN Sbjct: 1 MMERLISVTLWLILVLDLAFRVAGNAEGDALNALKTNLADPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNITGIIPEELGNLTNLVSLDLYLNGLNGHIPTTLGKLTRLRFLRLNNNSLSGQIPMSLTTVNSLQVLDLSNNLLVGDVPVNGSFSLFTPISFANNRLNN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2VZD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 1.361e-96 Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3 Query: 3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602 M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN Sbjct: 1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2V5B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 1.826e-96 Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3 Query: 3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602 M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN Sbjct: 1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0A1DZF0_GOSHI (Somatic embryogenesis receptor-like kinase 4 protein OS=Gossypium hirsutum GN=SERK4 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 8.273e-96 Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = -3 Query: 3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602 M +RLIS CL LI VLDL FR++GNAEGDALNALK N+ DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN Sbjct: 1 MMERLISVCLQLILVLDLVFRISGNAEGDALNALKNNLADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW42_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G063200 PE=4 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 6.999e-92 Identity = 160/197 (81.22%), Postives = 172/197 (87.31%), Query Frame = -3 Query: 6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596 +R + CLWLI VL+L FR AGNAEGDALNALKTNM DPNNVLQSWD TLVNPCTWFHVTCN+ENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSN I+GTIP+ELGNLT LVSLDLYLN LTG IPTTLG+L KLRFLRLNNN+L G IPR LT I++LQVLDLSNN L GD+PV GSFSLFTPISF NN L Sbjct: 2 ERFVPLCLWLILVLELVFRAAGNAEGDALNALKTNMADPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNKITGTIPEELGNLTNLVSLDLYLNNLTGGIPTTLGKLTKLRFLRLNNNTLTGQIPRVLTAINSLQVLDLSNNRLEGDIPVTGSFSLFTPISFNNNLLR 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G062900 PE=4 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 5.638e-90 Identity = 151/197 (76.65%), Postives = 170/197 (86.29%), Query Frame = -3 Query: 6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596 +RLIS CLWLI L L RVAGNAEGDALNALK N+ DPNN+LQ WDPT +NPC W+++TCN ENSVTR+DLGNA L+G+LVP LG L NLQYLELYSNNISG IP+E+GNLT LVSLDLYLN LTG IP TLG+L+KLRFLRLNNNSL G IP +LTTIDTLQVLD+SNN L GD+PVNGSFSLF PISF+NN+LN Sbjct: 2 ERLISVCLWLILALHLVLRVAGNAEGDALNALKNNLADPNNLLQDWDPTDINPCQWYNITCNGENSVTRIDLGNAKLSGKLVPDLGLLSNLQYLELYSNNISGEIPEEIGNLTNLVSLDLYLNVLTGHIPATLGKLRKLRFLRLNNNSLTGQIPMALTTIDTLQVLDVSNNQLEGDIPVNGSFSLFQPISFSNNRLN 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0B0PZP1_GOSAR (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Gossypium arboreum GN=F383_15318 PE=4 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.950e-89 Identity = 181/273 (66.30%), Postives = 192/273 (70.33%), Query Frame = -3 Query: 3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY--------------------------------LELYS-NNISGTIP-----------DELGNLTELVSL-DLYLNKLTG------------------------DIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY LE++ +SG +P LG + ++ + +LY N ++G DIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN Sbjct: 1 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLMPDLNSKFQVLLKGTRCTLDLRTPIQGARTLLEIFEVTTLSGAVPLCLVLRPDNNASTLGKVDMVLHVPELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 273
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 2.149e-89 Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = -3 Query: 12 MTQRLISFCL-WLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602 M +RL+ C WLI VLDL RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN K Sbjct: 1 MERRLMIPCFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.152e-74 Identity = 138/175 (78.86%), Postives = 151/175 (86.29%), Query Frame = -3 Query: 15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539 + N EGDAL++L+ N+VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA+L+GQLVPQLG L NLQYLELYSNNI+G +P +LGNLT LVSLDLYLN TG IP +LG+L KLRFLRLNNNSL G IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN Sbjct: 27 ASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 201
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 3.491e-72 Identity = 135/175 (77.14%), Postives = 147/175 (84.00%), Query Frame = -3 Query: 15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539 + N EGDAL+ L+ +VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA L+G LVP+LG L NLQYLELYSNNI+G IP LGNLT LVSLDLYLN +G IP +LG+L KLRFLRLNNNSL G+IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN Sbjct: 24 ASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 1.461e-70 Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = -3 Query: 3 RVAGNAEGDALNALKTNMV--DP-NNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 542 RVAGNAEGDAL LK ++ DP NNVLQSWD TLV PCTWFHVTCN EN VTRVDLGNA L+G+LVP+LG L NLQYLELYSNNI+G IP+ELG+L ELVSLDLY N ++G IP++LG+L KLRFLRLNNNSL+G IP +LT++ LQVLD+SNN L GD+PVNGSFSLFTPISFANN L + Sbjct: 26 RVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSVQ-LQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTD 207
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 1.714e-66 Identity = 125/192 (65.10%), Postives = 155/192 (80.73%), Query Frame = -3 Query: 9 LWLIFVLDLAFRVAGNAEGDALNALKTNMV---DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKL 575 +WLI LD RV G + DAL AL++++ NN+LQSW+ T V PC+WFHVTCN+ENSVTR+DLG+ANL+G+LVPQL LPNLQYLEL++NNI+G IP+ELG+L ELVSLDL+ N ++G IP++LG+L KLRFLRL NNSL+G IPRSLT + L VLD+SNN L GD+PVNGSFS FT +SFANNKL Sbjct: 10 IWLILFLDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKL 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.999e-26 Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = -3 Query: 6 ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT--PISFANNKLN 587 ++ L+F L V+ +A+GDAL AL+ ++ N L W+ VNPCTW V C+ +N VT + L + N +G L ++G L NL+ L L N I+G IP++ GNLT L SLDL N+LTG IP+T+G LKKL+FL L+ N L GTIP SLT + L L L +N L G +P SLF +F +N LN Sbjct: 9 MAMAFTLLFFACLCSFVSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNFTSNNLN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.490e-25 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N E AL +K+++ DP+ VL +WD T V+PC+W +TC S+ V R++ + NL+G L +G+L NLQ + L +N I+G IP E+G L +L +LDL N TG IP TL K L++LR+NNNSL GTIP SL + L LDLS N L G VP Sbjct: 40 NFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.992e-25 Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = -3 Query: 63 ISFCLW----LIFVLDLAFRVAG------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 587 + F +W L+FV A N E AL A+K + DP VL++WD V+PC+W V+C ++ V+ +DL + +L+G L P++G+L LQ + L +N I+G IP+ +G L +L SLDL N TG+IP +LG+LK L +LRLNNNSL GT P SL+ I+ L ++D+S N L G +P Sbjct: 4 VRFVVWRLGFLVFVWFFDISSATLSPTGVNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.002e-25 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = -3 Query: 63 SFCLWLIFVLDLAFRVAG-------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 584 SF +L F+ L V G N E AL +K ++ DP+ VL +WD V+PC+W VTC+SEN V + + NL+G L P + +L NL+ + L +NNI G IP E+G LT L +LDL N G+IP ++G L+ L++LRLNNNSL+G P SL+ + L LDLS N L G VP Sbjct: 14 SFFCFLGFLCLLCSSVHGLLSPKGVNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.581e-25 Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N E +AL +++ N+ DP+ L +WD V+PC+W +TC+ +N V + + +L+G L +G+L NL+ + L +NNISG IP ELG L +L +LDL N+ +GDIP ++ QL L++LRLNNNSL+G P SL+ I L LDLS N L G VP Sbjct: 35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bpback to top |