g.arboreum_cottongen_reftransV1_0006460, g.arboreum_cottongen_reftransV1_0006460 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0B0P269_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_23731 PE=4 SV=1) HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSDEDEVEGENETTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAEEAVKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ Sbjct: 1 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSDEDEVEGENETTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAEEAVKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 390
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2PFQ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1) HSP 1 Score: 642.499 bits (1656), Expect = 0.000e+0 Identity = 384/407 (94.35%), Postives = 388/407 (95.33%), Query Frame = -2 Query: 347 KRTKKPANHPTNHTMDRVFSVEEIPDHFWSSSAPD---DDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1558 K TKKPAN PTNHTMDRVFSVEE+PDHFWSSSA D DDKNKSP SEMNRS SEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDN PADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSA RAD G QASNTPQLGSKTVSRG GDKDDNAVAEV SFPSGQKK RAQVRPSTSTGSSKEQSDEDEVEGENET ENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENA+LLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMA EAVKRTTGLNPVFHALPEIPSMSSFDGCPS+TSTDAAVYEEDGPKHTLYQAAANDSISTH+LRINNALADISSVENIQPVSEGSAVTGNKIGRTASL RVASLEHLQKRI GGVSLNGKQ Sbjct: 3 KTTKKPANDPTNHTMDRVFSVEEVPDHFWSSSAADGGDDDKNKSPSSEMNRSASEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNSPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPSMSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVSLNGKQ 409
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2R0F6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 331/393 (84.22%), Postives = 337/393 (85.75%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFWSSSAPD---DDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516 MDRVFSVEE+PDHFWSSSA D DDKNKSP SEMNRS SEWAFQQFLR ++KLNLACAAVAMSMASFAKPQDSA RAD G QASNTPQLGSKTVSRG GDKDDNAVAEV SFPSGQKK RAQVRPSTSTGSSKEQSDEDEVEGENET ENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENA+LLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMA EAVKRTTGLNPVFHALPEIPSMSSFDGCPS+TSTDAAVYEEDGPKHTLYQAAANDSISTH+LRINNALADISSVENIQPVSEGSAVTGNKIGRTASL RVASLEHLQKRI GGVSLNGKQ Sbjct: 1 MDRVFSVEEVPDHFWSSSAADGGDDDKNKSPSSEMNRSASEWAFQQFLR----------------------------------------EEKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPSMSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVSLNGKQ 353
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A061F207_THECC (Light-inducible protein CPRF-2, putative OS=Theobroma cacao GN=TCM_026349 PE=4 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 7.569e-150 Identity = 286/407 (70.27%), Postives = 316/407 (77.64%), Query Frame = -2 Query: 353 MDRVFSVEEIPDHFWSSSAPDDDKN--KSPGSEMNRSTSEWAFQQFLRXXX--------------XXXXXXXXXXXXXXXXXXXNNK-HDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSM--SSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNG 1516 MDRVFSVEEI DHFWSSS+ + K PGS+MNRS SEWAFQQFLREE ++ + E + NK +NIPAD E+YQAFLK KLNLACAAVAMS ASF K QDSA RAD GSQASN+PQLGSK S+G G+KD NA E+ S P+GQKK AQVRPSTS GSS+E S+EDEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV QLRVENA L+K L DISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+ H PEI +M SSFDG PS+TSTDAAV +DGPKH LY+AAAN+ I HDLR++NALADISS ENIQP S GS V GNKIG TASL RVASLEHLQKRIRGGVS G Sbjct: 1 MDRVFSVEEISDHFWSSSSAVSAADDDKKPGSKMNRSASEWAFQQFLREEADRKGEDKKEEEEEAKEELKKKENGVMTSSNGGLENKDKNNIPADSEEYQAFLKTKLNLACAAVAMSRASFLKSQDSAARADSGSQASNSPQLGSKATSKGAGNKDGNAPVEIPSLPNGQKKSVAQVRPSTS-GSSRELSEEDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVGQLRVENASLMKRLADISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPLLHGSPEISTMAMSSFDGSPSDTSTDAAVPVQDGPKHPLYRAAANNPIFAHDLRVSNALADISSAENIQPNSGGSTVPGNKIGWTASLQRVASLEHLQKRIRGGVSPCG 406
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0B0NCG2_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_14363 PE=4 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 4.940e-149 Identity = 291/415 (70.12%), Postives = 329/415 (79.28%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFW--------SSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXX----------XNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516 MDRVFSVEEI DHFW ++SA DD NKS GS+MNRS SEWAFQQF+REEVDK+GED E E+N ++N+ D ++YQAFLK KLNLACAAVAMS ASF KPQDSA RAD GSQAS+TPQ GS S+G GDKD NA + S +GQKK AQVRPSTS GSS+E S++DEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAE++VKR TGL+PVFHA PEI + MSSFDG PS+TST+AAV +DGPKH LYQAAAN ISTHDLR NNALADISSVENIQP SE S+V+GNKIGRT S+ RVASLEHLQKR+ GG+S LNG++ Sbjct: 1 MDRVFSVEEISDHFWPSSSSSATTNSASADDDNKS-GSKMNRSASEWAFQQFIREEVDKEGEDEGVTEGDLKKKNGTPSFNNGCLESNGNNNVLVDSDEYQAFLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRMCGGISSCKPQLNGEK 413
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2R3Q8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1) HSP 1 Score: 439.113 bits (1128), Expect = 1.597e-146 Identity = 288/415 (69.40%), Postives = 327/415 (78.80%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFW--------SSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXX----------XNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516 MDRVFSVEEI DHFW ++SA DD NKS GS+MNRS SEWAFQQF+REEVDK+GED E E+N ++N+ D ++YQAFLK KLNLACAAVAMS ASF KPQDSA RAD GSQAS+TPQ S S+G GDK+ NA++ S +GQKK AQVRPSTS GSS+E S++DEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAE++VKR TGL+PVFH PEI + MSSFDG PS+TST+AA +DGPKH LYQAAAN ISTHDLR NNALADISSVENIQP SE S+V+GNKIGRT S+ RVASLEHLQKRI GG+S LNG++ Sbjct: 1 MDRVFSVEEISDHFWPSSSSSATTNSASADDDNKS-GSKMNRSASEWAFQQFIREEVDKEGEDEGVTEGDLKKKNGTASFNNGCLESNGNNNVLVDSDEYQAFLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSVSIATSKGAGDKNGNALSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHTSPEISTAGMSSFDGSPSDTSTEAAASVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGISSCKPQLNGEK 413
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: B9I5F3_POPTR (BZIP transcription factor family protein OS=Populus trichocarpa GN=POPTR_0013s03800g PE=4 SV=2) HSP 1 Score: 350.903 bits (899), Expect = 2.295e-112 Identity = 246/411 (59.85%), Postives = 288/411 (70.07%), Query Frame = -2 Query: 323 MDRVFSVEE-IPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIP--SMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRI--NNALADISSVENIQP-VSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ*EQGRQAE 1516 M+RVFSVE+ I + FWS P D S+MNRS SEWAF++FL+E + A + IP + +DY AFLK KLNLACAAVA++ ASF KP DS A+ GSQASNT QLGS S+G G DKD N S PS Q+K V+P+TS SS+E S++DE E E E TENM PAD KRVRRMLSNRESARRSR RKQAHLTELE+QV+QLRVEN+ LLKSLTDISQ+YNE+AV+NR+LKADVETL+AKVKMAEE VKR TGLN +FHALP+I SMSSFDG PS+T+ DAAV +D PKH Y+ A N+ I+THD R NN LADISSVEN+QP + V+GNK+GRT SL RVASLEHLQKRIRGG S G Q G QA+ Sbjct: 1 MERVFSVEDNITELFWSPPPPPPDD----LSKMNRSESEWAFERFLQEASACSFSNGTCATAASSFAAPAI----IPVESDDYHAFLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQLGSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSV-SSRELSEDDENEAETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRFTGLNTMFHALPDISTMSMSSFDGSPSDTA-DAAVPVKDDPKHHFYK-APNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGVSGNKMGRTPSLQRVASLEHLQKRIRGGASPCGPQ-SNGEQAK 399
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: F6HTR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02200 PE=4 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 4.114e-111 Identity = 241/424 (56.84%), Postives = 285/424 (67.22%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXX-------------------------XXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEI--PSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516 MDRVFSV+EIP+ FW+S + S+MNRS SEWAFQ+FL+E + + N+P D E+YQAFLK +LNLACAAVA+S ASF KPQDSA AD GSQAS T QL S+ +G+G DK+ + S P+ QKK AQ+RP+TS SS+E SD+DEVEGE ET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLR+EN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+F + EI M SFDG PS+TS DAAV +D PK Y + +++ ISTHD RINN LAD+SSVE++ + GNK+GRTASL RVASLEHLQKRIRG V NG Q Sbjct: 1 MDRVFSVDEIPEQFWASPP----SSSKEPSQMNRSASEWAFQRFLQESSSPPSSSSVSASGPSAENDVVELKVPIDDPKPTPAPPAPPAPATSLDPPPNVPIDSEEYQAFLKSRLNLACAAVALSRASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSE-SSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAV--NGPQ 417
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A072VN13_MEDTR (Transcription factor bZIP88 OS=Medicago truncatula GN=MTR_1g080920 PE=4 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 6.895e-107 Identity = 217/401 (54.11%), Postives = 271/401 (67.58%), Query Frame = -2 Query: 368 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIP-------ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG----------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTA-SLHRVASLEHLQKRIRGG 1516 MDRVFSV+EIPDH WS S+M+RS SEWAFQ+FL+E + + +P D ++Y+AFLK KLNLACAAVAM+ S K QD AT + G Q+SN Q+GS+ +S G+G DKD V S P QKK +RPSTS GSS+EQSD+DE EGE ++ DP DVKRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLR EN+ L+K LTD++Q+Y ++AV+NR+LKADVETL+AKVKMAEE VKR TGLNP+FH +P++ SM +FDG PS+ DAAV +D P H YQ + + + HD+R++N L +ISS+EN+QP + + V GNK+G+TA LHRVASLEHLQKRIRGG Sbjct: 1 MDRVFSVDEIPDHLWSPQIHVSGSAGDESSKMSRSASEWAFQRFLQEAASPSPSSSSVADNTGFADAAAKDGAVLPNGPPPVAVDSDEYRAFLKSKLNLACAAVAMTRGSLTKSQDLATFPENGPQSSNATQVGSQPISEGSGPSGNDPPILQDKDAKVPPAVPSIPHVQKKTIVAIRPSTS-GSSREQSDDDEAEGETYMIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVKRLTDVNQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFHVMPDMSSMPAFDGSPSDNLADAAVPVQDDPHHHFYQPTSINPMPCHDMRVSNGLGEISSIENVQP-NNAAVVGGNKMGQTAPPLHRVASLEHLQKRIRGG 399
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A5BP13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022136 PE=4 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 1.450e-106 Identity = 240/432 (55.56%), Postives = 284/432 (65.74%), Query Frame = -2 Query: 365 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXX----------------------XXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMS-----------------MASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEI--PSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGV 1516 MDRVFSV+EIP+ FW+S +K P S+MNRS SEWAFQ+FL+E + + N+P D E+YQAFLK +LNLACAAVA+S ASF KPQDSA AD GSQAS T QL S+ +G+G DK+ + S P+ QKK AQ+RP+TS SS+E SD+DEVEGE ET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLR+EN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+F + EI M SFDG PS+TS DAAV +D PK Y + +++ ISTHD RINN LAD+SSVE++ + GNK+GRTASL RVASLEHLQKRIRG V Sbjct: 1 MDRVFSVDEIPEQFWASPP---SSSKEPSSQMNRSASEWAFQRFLQESSSPPSSSSVSASGPSAENDVVELKVPIDDPKPTPAPPAPATSLDPPPNVPIDSEEYQAFLKSRLNLACAAVALSRVTVDQLPLPLHKLQIIQASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSE-SSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAV 428
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2) HSP 1 Score: 313.153 bits (801), Expect = 1.507e-99 Identity = 221/408 (54.17%), Postives = 272/408 (66.67%), Query Frame = -2 Query: 347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHD---NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-----DKDDNAVAEVLS--FPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALP-EIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516 MDRVFSVE+I D FWS A +D S MNRS SEWAFQ FL++ + + N + N+P D EDYQA+LK +L+LACAAVA++ AS KPQDSA D GSQASNT QL S+ +G+G ++D A+A + P+ QKK QV+ +TS S D+DE+EGE ETT N DP+D KRVRRMLSNRESARRSRRRKQAH+TELE+QVSQLRVEN+ LLK LTDISQRYN+AAV+NR+LKAD+ET++AKVKMAEE VKR TGLNP+F ++ EI + M SF G PS+TS D +DG K YQ A + D +I N L + V+N+Q S V GNK+ RT+S+ RVASLEHLQKRIRGGVS ++GKQ Sbjct: 1 MDRVFSVEDISDQFWSPPARED----SSKLVMNRSDSEWAFQSFLQQASALESSQPLPSDPVPVAGDVKNPVEIPANVPVDSEDYQAYLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSADTT---QDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVSSCEAQVSGKQ 401
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 8.036e-61 Identity = 163/382 (42.67%), Postives = 216/382 (56.54%), Query Frame = -2 Query: 374 MDRVFSVEEIP-DHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIR 1516 M++VFS EEI +H WS + + +NRS SEWAF +F++E + + N +P D E+Y+AFLK KLNLACAAVAM +F KPQD++ R+D G G + + ++A + P + S S S E+ E + NM+P +VKRV+RMLSNRESARRSRRRKQAHL+ELE+QVSQLRVEN+ L+K LTD++Q +N+A+V NR+LKA++ETL+AKVKMAEE VKR TG NP+FH +P+I S S PSETS + P T Q + IS+ + +G A+ G K+ RTAS+ RV SLEHLQKRIR Sbjct: 1 MEKVFSDEEISGNHHWSVNGM---------TSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPN----VPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG----------------GANESEQASLASSKATP-----MMSSAITSGSELSGDEE--------EADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL---PSETS--------NSPDTTSSQVTTPEIISSGN--------------------KGKALIGCKMNRTASMRRVESLEHLQKRIR 309
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.020e-22 Identity = 96/207 (46.38%), Postives = 135/207 (65.22%), Query Frame = -2 Query: 668 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVF 1288 D +DY+ LK KL CA V KP+DS + + Q + S +++G + S P+ KK ++ TS GSS+E SD+++++ ENETT ++ P DVK+ RRMLSNRESARRSRRRKQ ++LE+QV+ L+ E++ LLK L++++ +Y+EAAV NRILKAD+ETL+AKVKMAEE VKR TG+NP+ Sbjct: 113 VDSDDYRRVLKNKLETECATVVSLRVGSVKPEDSTSSPETQLQP-----VQSSPLTQG-------ELGVTSSLPAEVKKTGVSMKQVTS-GSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.717e-22 Identity = 101/230 (43.91%), Postives = 139/230 (60.43%), Query Frame = -2 Query: 605 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPE--IPSMSSFDGCPSETST 1288 D Y A LK KL LACAAVA + + KP+DS+ A QA GS G + V P+ + + V ++ SS++ SD+D+++G+ + DP DVKR RRMLSNRESARRSRRRKQ + E ++QV QLR E++ L+ L+D++ +Y+ AAV+NRIL+AD+ETL+ KVKMAEE VKR TG+NP+ + P IP F PS +S+ Sbjct: 129 VDPNQYHAILKSKLELACAAVARRVGTV-KPEDSSASASNQKQAQ-----GSIVAQTSPG------ASSVRFSPTTSTQKKPDVPARQTSISSRDDSDDDDLDGDADN---GDPTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.014e-12 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = -2 Query: 632 KFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKR---TTGLNPVF--HALPEIPSMSSF 1054 + R VR +TS S DED ++ DP D+KR+RRM SNRESA+RSRRRKQ +L +LE+QV L+ +N+ L K L D +Q++ A NNR+LK+DVETL+ KVK+AE+ V R T+ LN + H P S+SS Sbjct: 83 EVRGGVRRTTSGSSHVNSDDEDAETEAGQSEMTNDPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSL 228
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 7.966e-10 Identity = 42/69 (60.87%), Postives = 57/69 (82.61%), Query Frame = -2 Query: 731 KRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETL 937 +RVR+ SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+ + ++Q+YN+A V+NR+L+AD+ETL Sbjct: 227 ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETL 295 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006460 ID=g.arboreum_cottongen_reftransV1_0006460; Name=g.arboreum_cottongen_reftransV1_0006460; organism=Gossypium arboreum; type=contig; length=1559bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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