g.arboreum_cottongen_reftransV1_0008529, g.arboreum_cottongen_reftransV1_0008529 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A0B0MHP2_GOSAR (Tenomodulin OS=Gossypium arboreum GN=F383_02739 PE=4 SV=1) HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1177 EKLAFFQGLEKKVENENEKLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD Sbjct: 737 EKLAFFQGLEKKVENENEKLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1128
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A0D2QQM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G108400 PE=4 SV=1) HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0 Identity = 388/392 (98.98%), Postives = 388/392 (98.98%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1177 EKLAFFQGLEKKVE ENEKLSHLHEWLHSNIENLDYG DGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTD KDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPK AFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD Sbjct: 738 EKLAFFQGLEKKVEKENEKLSHLHEWLHSNIENLDYGTDGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDKKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKYAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1129
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A061DSG2_THECC (Embryo defective 1703, putative isoform 2 OS=Theobroma cacao GN=TCM_005143 PE=4 SV=1) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 345/391 (88.24%), Postives = 366/391 (93.61%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 EKLAFFQGLEKKVE EN+KLSHLHEWLHSNIENLDYGADGISL+DPPEKI+PRWKGPPLEKSPE L+NFQEQRKALFTGK G+ YPAK+D Q F+Q+ E INE L ISSSE DL RK+ D D KD KIV+E SDGSVKPGKKSGKEYWQHTKKWSRGFLE YNAET+PEVKSIMKDMGKDLDRWITEKE+QEAADLM KLPERNKKFMEKKLNKLKREMELFGPQAVVSKY+EYAE+KEEDYLWWLDL HVLCIELYTF+NE QRIGFYALEMAADLELEPKPHHVIAFEDTGDCK+FCYI+Q H+DMLGNGRAFIVPQPPKDAFREAKANGFGVTVI+KGELQLNVDQTLEEVEEQICEIGSK+YHDKIMRERSVDISSLMKG+LGV Sbjct: 746 EKLAFFQGLEKKVEKENKKLSHLHEWLHSNIENLDYGADGISLYDPPEKIVPRWKGPPLEKSPELLNNFQEQRKALFTGKTGIAYPAKKDEQGFIQRFVEPHINEKLTISSSELDLKRKLQDGDPKDSKIVVEGSDGSVKPGKKSGKEYWQHTKKWSRGFLESYNAETNPEVKSIMKDMGKDLDRWITEKEIQEAADLMTKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYREYAEDKEEDYLWWLDLRHVLCIELYTFDNEEQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKNFCYIIQDHMDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIRKGELQLNVDQTLEEVEEQICEIGSKIYHDKIMRERSVDISSLMKGVLGVS 1136
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A061DSN4_THECC (Embryo defective 1703, putative isoform 1 OS=Theobroma cacao GN=TCM_005143 PE=4 SV=1) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 345/391 (88.24%), Postives = 366/391 (93.61%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 EKLAFFQGLEKKVE EN+KLSHLHEWLHSNIENLDYGADGISL+DPPEKI+PRWKGPPLEKSPE L+NFQEQRKALFTGK G+ YPAK+D Q F+Q+ E INE L ISSSE DL RK+ D D KD KIV+E SDGSVKPGKKSGKEYWQHTKKWSRGFLE YNAET+PEVKSIMKDMGKDLDRWITEKE+QEAADLM KLPERNKKFMEKKLNKLKREMELFGPQAVVSKY+EYAE+KEEDYLWWLDL HVLCIELYTF+NE QRIGFYALEMAADLELEPKPHHVIAFEDTGDCK+FCYI+Q H+DMLGNGRAFIVPQPPKDAFREAKANGFGVTVI+KGELQLNVDQTLEEVEEQICEIGSK+YHDKIMRERSVDISSLMKG+LGV Sbjct: 746 EKLAFFQGLEKKVEKENKKLSHLHEWLHSNIENLDYGADGISLYDPPEKIVPRWKGPPLEKSPELLNNFQEQRKALFTGKTGIAYPAKKDEQGFIQRFVEPHINEKLTISSSELDLKRKLQDGDPKDSKIVVEGSDGSVKPGKKSGKEYWQHTKKWSRGFLESYNAETNPEVKSIMKDMGKDLDRWITEKEIQEAADLMTKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYREYAEDKEEDYLWWLDLRHVLCIELYTFDNEEQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKNFCYIIQDHMDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIRKGELQLNVDQTLEEVEEQICEIGSKIYHDKIMRERSVDISSLMKGVLGVS 1136
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A0D2P730_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G108400 PE=4 SV=1) HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0 Identity = 321/324 (99.07%), Postives = 321/324 (99.07%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPK 973 EKLAFFQGLEKKVE ENEKLSHLHEWLHSNIENLDYG DGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTD KDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPK Sbjct: 738 EKLAFFQGLEKKVEKENEKLSHLHEWLHSNIENLDYGTDGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDKKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERNKKFMEKKLNKLKREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPK 1061
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A067K9J0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14255 PE=4 SV=1) HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0 Identity = 293/391 (74.94%), Postives = 339/391 (86.70%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 +K F +GLEKKVE ENEKLS +HE+LHSNIENLDYGADGISL+DPPEK IPRWKGP LEK+PEFL+ F EQR A+F G + K+D Q+ QK TES +N++ A SSS++ + + + D PK +IE SDGS++ G K+GKEYWQHTKKWSRGFLE YN+ETDP++KS MKD+GKDLDRWITE+E+QEAADLMKKLPERNKKF+EKK+NK+KREMELFGPQAVVSKY+EYAEEKEEDYLWWLDLPHVLCIELYT +N Q+IGFY+LEMAADLELEPKP HVIAFED GDCK+ C I+QAH+DMLGNG AF+VP+PPKDAFREAKANGFGVTVI+K ELQLNVDQTLEEVEEQI EIGSKMYHDK+M+ERSVDIS+LMKG+ GV Sbjct: 744 DKTKFLKGLEKKVEKENEKLSRVHEYLHSNIENLDYGADGISLYDPPEKFIPRWKGPSLEKNPEFLNQFLEQRNAIFDGNASNSSLGKKDEQNLTQKSTESSVNDNAATSSSDNASEKNLRNKDPNVPKTIIEGSDGSIRAGTKTGKEYWQHTKKWSRGFLESYNSETDPDMKSTMKDIGKDLDRWITEEEIQEAADLMKKLPERNKKFVEKKINKIKREMELFGPQAVVSKYREYAEEKEEDYLWWLDLPHVLCIELYTTQNGEQKIGFYSLEMAADLELEPKPCHVIAFEDAGDCKNLCCIIQAHMDMLGNGHAFVVPRPPKDAFREAKANGFGVTVIRKKELQLNVDQTLEEVEEQIAEIGSKMYHDKLMQERSVDISALMKGVFGVN 1134
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: M5X5A5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021416mg PE=4 SV=1) HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0 Identity = 299/389 (76.86%), Postives = 342/389 (87.92%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLG 1168 +K AFF+GLEKKVE EN+KLS LHEWLHSNIENLDYGA+GISL+DPPEKIIPRWKGPPLEKSPEFL+ FQEQR +F G G++ K+D Q+ LQK TES E++A SS SD +K D ++ KIVIE SDGSV+ GKKSGKE+WQHTKKWS+GFLE YNAETDPE+K+ M+DMGK LDRWITEKE+QEAADLM K+PE+NKKFMEKKL+KLKREMELFGPQAVVSKY+EYAE+K+EDYLWWLDLP+VLCIELYT +NE QRIGFY+LEMAADLELEPKP+HVIAFEDT DCK+ YI+QA +DM GNG AF+V QPPKD FREAKANGFGVTVI+KGE+QLNVDQTLEEVEEQI EIGSK+YHDKIM+ERS+DISSLMKG+ G Sbjct: 767 DKDAFFKGLEKKVEKENKKLSKLHEWLHSNIENLDYGAEGISLYDPPEKIIPRWKGPPLEKSPEFLNYFQEQRNTIFAGNDGIS--VKKDEQNILQKSTESQSQENIATSSVVSDPNKK----DNRNSKIVIEGSDGSVRAGKKSGKEFWQHTKKWSQGFLESYNAETDPEIKATMRDMGKGLDRWITEKEIQEAADLMNKMPEKNKKFMEKKLSKLKREMELFGPQAVVSKYREYAEDKKEDYLWWLDLPYVLCIELYTVDNEEQRIGFYSLEMAADLELEPKPYHVIAFEDTNDCKNLGYIIQAQMDMFGNGHAFVVAQPPKDVFREAKANGFGVTVIRKGEVQLNVDQTLEEVEEQITEIGSKIYHDKIMQERSMDISSLMKGVFG 1149
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A067HES7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001135mg PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 300/393 (76.34%), Postives = 340/393 (86.51%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRK--VHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 +KLAFF+GLEKKVE ENEKL LHE+LHSNIENLDYGADGIS++DPPEKIIPRWKGPPLEK+PEFL +F +QRKALF G G +YP K+D ++FLQ PTESP E A S L RK + D D K VI+ SDGSVKPGKK GKE+WQ+TKKWSRGFLE YNAETDPEVKS+MKD+GKDLDRWITE+E+QE+ADLM L ERNK+FMEKK+NKLKREMELFGPQAVVSKY+EYAEE+EEDYLWWLDLPHVLCIELYT + QR+GFY+LEMA DLELEPKPHHVIAFED DCK+ CYI+QAHL+MLG G+AF+VP+PPKDAFREAKA+GF VTVI++ ELQLNVDQTLEEVEEQI EIGSK+YHD IM ERSVDISS+MKG+LG G Sbjct: 738 DKLAFFKGLEKKVEKENEKLLQLHEYLHSNIENLDYGADGISIYDPPEKIIPRWKGPPLEKNPEFLDDFLKQRKALFVGNTGSSYPVKKDEENFLQNPTESPTLEKDATS-----LARKKEIQDNDPNHSKTVIDGSDGSVKPGKKYGKEFWQYTKKWSRGFLESYNAETDPEVKSVMKDIGKDLDRWITEEEIQESADLMTNLHERNKRFMEKKINKLKREMELFGPQAVVSKYREYAEEEEEDYLWWLDLPHVLCIELYTVDKGEQRVGFYSLEMATDLELEPKPHHVIAFEDASDCKNLCYIIQAHLEMLGTGQAFVVPRPPKDAFREAKASGFSVTVIRRAELQLNVDQTLEEVEEQITEIGSKIYHDAIMEERSVDISSIMKGVLGGG 1125
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A067HF30_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001135mg PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 300/393 (76.34%), Postives = 340/393 (86.51%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRK--VHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 +KLAFF+GLEKKVE ENEKL LHE+LHSNIENLDYGADGIS++DPPEKIIPRWKGPPLEK+PEFL +F +QRKALF G G +YP K+D ++FLQ PTESP E A S L RK + D D K VI+ SDGSVKPGKK GKE+WQ+TKKWSRGFLE YNAETDPEVKS+MKD+GKDLDRWITE+E+QE+ADLM L ERNK+FMEKK+NKLKREMELFGPQAVVSKY+EYAEE+EEDYLWWLDLPHVLCIELYT + QR+GFY+LEMA DLELEPKPHHVIAFED DCK+ CYI+QAHL+MLG G+AF+VP+PPKDAFREAKA+GF VTVI++ ELQLNVDQTLEEVEEQI EIGSK+YHD IM ERSVDISS+MKG+LG G Sbjct: 738 DKLAFFKGLEKKVEKENEKLLQLHEYLHSNIENLDYGADGISIYDPPEKIIPRWKGPPLEKNPEFLDDFLKQRKALFVGNTGSSYPVKKDEENFLQNPTESPTLEKDATS-----LARKKEIQDNDPNHSKTVIDGSDGSVKPGKKYGKEFWQYTKKWSRGFLESYNAETDPEVKSVMKDIGKDLDRWITEEEIQESADLMTNLHERNKRFMEKKINKLKREMELFGPQAVVSKYREYAEEEEEDYLWWLDLPHVLCIELYTVDKGEQRVGFYSLEMATDLELEPKPHHVIAFEDASDCKNLCYIIQAHLEMLGTGQAFVVPRPPKDAFREAKASGFSVTVIRRAELQLNVDQTLEEVEEQITEIGSKIYHDAIMEERSVDISSIMKGVLGGG 1125
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: B9I8Y5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09460g PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 287/391 (73.40%), Postives = 334/391 (85.42%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVG 1174 +KL FF+GLEKKVE ENEKL +HE+LHS+IENLDYGADGISL+D PEKIIPRWKGPPLEK+P+FL+NF EQ+ A+ G +YP K+D + LQK +S ++E + +S + ++K+ D+K+ K+VIE SDGSV+ GKKSGKEYWQHTKKWSRGFLE YNAE+DPEVKS MKD+GKDLDRWITE+E+QEAADLM KLPERNK +K REMELFGPQAVVSKY+EYAEEKEEDYLWWLDLPHVLCIELYT EN Q+IGFY+LEMAADLELEPKP HVIAFED GDCK+ C I+QAH+DM+G G AF+VP+PPKDAFREAKANGFGVTVI+KGELQLNVDQ LEEVEEQ+ EIGSK+YHDK+M ERSVDI+SLMKG+LGVG Sbjct: 737 DKLKFFKGLEKKVEKENEKLVQVHEYLHSSIENLDYGADGISLYDSPEKIIPRWKGPPLEKNPQFLNNFLEQQNAIAATNAGTSYPVKKDEDNLLQKSNKSSVDESVG-TSLPNYASKKLSCMDSKNSKVVIEGSDGSVRSGKKSGKEYWQHTKKWSRGFLESYNAESDPEVKSTMKDIGKDLDRWITEEEIQEAADLMTKLPERNKLIEKKITKLK-REMELFGPQAVVSKYREYAEEKEEDYLWWLDLPHVLCIELYTIENGEQKIGFYSLEMAADLELEPKPCHVIAFEDAGDCKNLCCIIQAHMDMVGTGHAFVVPRPPKDAFREAKANGFGVTVIRKGELQLNVDQMLEEVEEQVAEIGSKIYHDKLMGERSVDINSLMKGVLGVG 1125 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008529 ID=g.arboreum_cottongen_reftransV1_0008529; Name=g.arboreum_cottongen_reftransV1_0008529; organism=Gossypium arboreum; type=contig; length=1357bpback to top |