g.arboreum_cottongen_reftransV1_0009735, g.arboreum_cottongen_reftransV1_0009735 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0B0N9R7_GOSAR (Dynamin-related 5A-like protein OS=Gossypium arboreum GN=F383_04251 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.389e-61 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP Sbjct: 301 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 400
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0D2Q8Y0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G069500 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 8.631e-61 Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCS+VNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP Sbjct: 301 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSEVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 400
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0D2R1V7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G069500 PE=4 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.259e-60 Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCS+VNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP Sbjct: 301 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSEVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 400
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0B0P1D2_GOSAR (Dynamin-related 5A-like protein OS=Gossypium arboreum GN=F383_25308 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.514e-58 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCS+VNIEL R+DSKIQATSDVSHLRKSAMMHAA ISNHVGVLIDGAADP+P Sbjct: 299 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSEVNIELERLDSKIQATSDVSHLRKSAMMHAASISNHVGVLIDGAADPAP 398
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A061F7K9_THECC (Dynamin related protein 5A isoform 2 OS=Theobroma cacao GN=TCM_031538 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 9.515e-56 Identity = 91/100 (91.00%), Postives = 98/100 (98.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L+DGIKGGYDEEKF+PYIGF SLREYLESELQKRYKEAAPATLALLEQRCS+VNIELAR+DSKIQATSDV+HLR+SAMMHAA ISNHVGVLIDGAADP+P Sbjct: 110 LNDGIKGGYDEEKFRPYIGFSSLREYLESELQKRYKEAAPATLALLEQRCSEVNIELARMDSKIQATSDVAHLRRSAMMHAASISNHVGVLIDGAADPAP 209
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A061F6M6_THECC (Dynamin related protein 5A isoform 1 OS=Theobroma cacao GN=TCM_031538 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.127e-55 Identity = 91/100 (91.00%), Postives = 98/100 (98.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L+DGIKGGYDEEKF+PYIGF SLREYLESELQKRYKEAAPATLALLEQRCS+VNIELAR+DSKIQATSDV+HLR+SAMMHAA ISNHVGVLIDGAADP+P Sbjct: 300 LNDGIKGGYDEEKFRPYIGFSSLREYLESELQKRYKEAAPATLALLEQRCSEVNIELARMDSKIQATSDVAHLRRSAMMHAASISNHVGVLIDGAADPAP 399
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0D2UZJ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G384500 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 6.806e-55 Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L DGIKGGYDEEKFKPYIGFCSLREYLE ELQKRYKEAAPATLALLEQRCS+VNIEL R+DSKIQATSDVSHLRKSAMMHAA ISN VGVLIDGAADP+P Sbjct: 299 LRDGIKGGYDEEKFKPYIGFCSLREYLELELQKRYKEAAPATLALLEQRCSEVNIELERLDSKIQATSDVSHLRKSAMMHAASISNQVGVLIDGAADPAP 398
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: F6H235_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02500 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.813e-49 Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L DGIKGG+DEEKF+P+IGF LREYLESELQKRYKEAAPATLALLEQRC +V ELAR+DSKIQATSDV+HLR+ AM+H A ISNHVGVLIDGAADP+P Sbjct: 319 LRDGIKGGFDEEKFRPFIGFGCLREYLESELQKRYKEAAPATLALLEQRCCEVTTELARLDSKIQATSDVAHLRRCAMLHTASISNHVGVLIDGAADPAP 418
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: B9HZT9_POPTR (Dynamin family protein OS=Populus trichocarpa GN=POPTR_0011s11930g PE=4 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.443e-49 Identity = 81/100 (81.00%), Postives = 92/100 (92.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L DG+KGG+DEEKF+PYIGF +LR+YLESELQKRYKEAAPATLALLEQRC +VN EL R+DSKI ATSDV+HLR+SAM+HAA ISNHVG LIDGAADP+P Sbjct: 299 LRDGVKGGFDEEKFRPYIGFSTLRDYLESELQKRYKEAAPATLALLEQRCCEVNAELDRMDSKILATSDVAHLRRSAMLHAASISNHVGALIDGAADPAP 398
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: K7LV22_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.349e-48 Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L +G+KGG+DEEKFK YIGF LR+YLESELQK+YKEAAPATLALLEQRCS++ ELAR+DSKIQATSDVSHLRKSAM+HAA ISNHVG LIDGAADPSP Sbjct: 296 LQEGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSELTSELARMDSKIQATSDVSHLRKSAMLHAASISNHVGALIDGAADPSP 395
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy Swiss-Prot
Match: DRP5A_ARATH (Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 5.483e-44 Identity = 72/100 (72.00%), Postives = 89/100 (89.00%), Query Frame = 3 Query: 3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302 L +G+KGG+DEEKF+ IGF SLR++LESELQKRYKEAAPATLALLE+RCS+V ++ R+D KIQATSDV+HLRK+AM++ A ISNHVG LIDGAA+P+P Sbjct: 307 LREGVKGGFDEEKFRSCIGFGSLRDFLESELQKRYKEAAPATLALLEERCSEVTDDMLRMDMKIQATSDVAHLRKAAMLYTASISNHVGALIDGAANPAP 406 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0009735 ID=g.arboreum_cottongen_reftransV1_0009735; Name=g.arboreum_cottongen_reftransV1_0009735; organism=Gossypium arboreum; type=contig; length=303bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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