mGhCIR0490 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Marker Overview


Name	mGhCIR0490
Alias	mGhCIR490
Genbank ID	N/A
Type	SSR
Species	Gossypium hirsutum
Repeat Motif	(AAG)6
Primer 1	mGhCIR0490_F: ATATCAAGAAAAGCATGCAAC
Primer 2	mGhCIR0490_R: TTGACAGACTGCACTGAGATA
Product Length	152
Publication	[view all]
Comment	Data obtained from publication. 2014

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
A01	chromosome	A01:56056644..56056797 .	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	CottonGen marker alignment to genome using primer sequences

Publications


Year	Publication
2012	Lacape JM, Claverie M, Vidal RO, Carazzolle MF, Guimarães Pereira GA, Ruiz M, Pré M, Llewellyn D, Al-Ghazi Y, Jacobs J, Dereeper A, Huguet S, Giband M, Lanaud C. Deep sequencing reveals differences in the transcriptional landscapes of fibers from two cultivated species of cotton. PloS one. 2012; 7(11):e48855.