mGhCIR0429 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Marker Overview


Name	mGhCIR0429
Alias	mGhCIR429
Genbank ID	N/A
Type	SSR
Species	Gossypium hirsutum
Repeat Motif	(TA)6
Primer 1	mGhCIR0429_F: TTGTCATGGATCTTCTAGGTG
Primer 2	mGhCIR0429_R: AAGATGACCAGGTTTAGAAGC
Product Length	136
Publication	[view all]
Comment	Data obtained from publication. 2014

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
A11	chromosome	A11:3452331..3452468 .	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	CottonGen marker alignment to genome using primer sequences

Publications


Year	Publication
2012	Lacape JM, Claverie M, Vidal RO, Carazzolle MF, Guimarães Pereira GA, Ruiz M, Pré M, Llewellyn D, Al-Ghazi Y, Jacobs J, Dereeper A, Huguet S, Giband M, Lanaud C. Deep sequencing reveals differences in the transcriptional landscapes of fibers from two cultivated species of cotton. PloS one. 2012; 7(11):e48855.