NAU_RAD_A06_2845454, NAU_RAD_A06_2845454 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A06_2845454
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D06chromosomeD06:2380923..2381223 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
A06chromosomeA06:2775078..2775378 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:2262644..2262944 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018207.1chromosomeCM018207.1:2606423..2606723 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:2147308..2147608 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold445.1supercontigscaffold445.1:468826..469126 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold2101.1supercontigscaffold2101.1:259405..259705 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:1987242..1987542 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A06chromosomeA06:2306508..2306808 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:2399099..2399398 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A06chromosomeGhir_A06:2685001..2685301 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:2260188..2260488 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:2526026..2526326 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:2400382..2400682 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:2588273..2588573 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:2519288..2519588 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A06chromosomeA06:2547963..2548263 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:2348807..2349107 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A06chromosomeGbar_A06:2497897..2498197 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:2351850..2352150 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
A06chromosomeA06:2560813..2561113 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:2470322..2470622 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017615.1chromosomeCM017615.1:2513534..2513834 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:2477543..2477843 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017641.1chromosomeCM017641.1:2696339..2696639 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:2370986..2371286 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017693.1chromosomeCM017693.1:2634253..2634553 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:2455534..2455834 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A06chromosomeA06:2656580..2656880 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:2618889..2619188 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:2164194..2164493 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_06chromosomeB_06:94845291..94845591 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr10chromosomeChr10:2357816..2358117 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr10chromosomeChr10:2333486..2333786 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
F06chromosomeF06:2024869..2025169 +Gossypium longicalyx (F1) genome NSF_v1n/a
A06chromosomeNAU_RAD_A06_2845454:1..301 .
A06:2306508..2306808 +		n/a
D06chromosomeNAU_RAD_A06_2845454:2..301 .
D06:1987242..1987542 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch06_At.06N/A5.43A06_2845454View
Sequence
>NAU_RAD_A06_2845454 ID=NAU_RAD_A06_2845454; Name=NAU_RAD_A06_2845454; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
AAAATTAATCTGAATTTAAAATGATACAAAATCTAAAATAATTCGAAAAT
TTTAGAACTTAAATCCATCCATTTTGAATTAACTCCTCAATAATTTGACA
TGAAATTATCTAAATCTAAATTGATCCCGAATTCAGAATAAAAATAACTT
ATATAATTCAAACTCAAGTTTCAAACTCGAATAAAAAAATTCAAAATATT
CTAAACACGACTTAAATAATCGATCGACAAACTTAAAGGACTCGCCATGA
ATGATTCGTACATAAAATAATCTAAATTTAAAATAATTTAAAATATAAAA
T