NAU_RAD_A06_2727401, NAU_RAD_A06_2727401 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A06_2727401
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A06chromosomeA06:2647776..2648076 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018207.1chromosomeCM018207.1:2521417..2521716 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr06_CRI-A2_v1.0.a1chromosomeChr06_CRI-A2_v1.0.a1:2229673..2229973 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_06chromosomeD10_06:57866031..57866337 -Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016619.1chromosomeCM016619.1:143095681..143095984 -Gossypium australe (G2) genome CRI_v1.1n/a
scaffold445.1supercontigscaffold445.1:356241..356541 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold1254_A06supercontigscaffold1254_A06:90020..90320 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A06chromosomeGhir_A06:2565106..2565406 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A06chromosomeA06:2420600..2420900 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A06chromosomeA06:2477445..2477745 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A06chromosomeA06:2437114..2437414 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A06chromosomeGbar_A06:2412899..2413198 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A06chromosomeA06:2466483..2466782 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017615.1chromosomeCM017615.1:2429934..2430233 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:2591449..2591749 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017693.1chromosomeCM017693.1:2549286..2549585 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A06chromosomeA06:2545729..2546029 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:2517396..2517696 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:2522342..2522642 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_06chromosomeB_06:95007475..95007774 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr10chromosomeChr10:1935468..1935785 +Gossypium lobatum (D7) genome ISU_v1n/a
F06chromosomeF06:1929267..1929573 +Gossypium longicalyx (F1) genome NSF_v1n/a
scaffold1254_A06supercontigNAU_RAD_A06_2727401:1..301 .
scaffold1254_A06:90020..90320 -		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch06_At.06N/A3.72A06_2727401View
Sequence
>NAU_RAD_A06_2727401 ID=NAU_RAD_A06_2727401; Name=NAU_RAD_A06_2727401; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
TTTTTTTTGCTCTATTGTTAATAATTTTAGTTTTAACATACTTTGTCACA
AAAGAATTTGCTATTGTGACAAAATTAACTATCACAAAAAAAAAAGTTAT
CGTGATAAAGTTAATAGTTACAAAAGAATGAAGTTATTGTGACAAAGACG
AAAGGCGTGATTGATAAAATAAAAAGAGAATTCTATGTGTTTGTTGGGAA
AGTTGCTATTGCTCATTCCATGTCCTGTTATAACGAAATCGTTTCTCTAC
TTAGCCGATTGAATTGGGTCTTGAATAAGTTTCATTTGTACCGAGTTTGG
T