NAU_RAD_A05_60392163, NAU_RAD_A05_60392163 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A05_60392163
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A05chromosomeA05:97915822..97916122 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018206.1chromosomeCM018206.1:99739633..99739933 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:95715321..95715621 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A05chromosomeA05:89545522..89545822 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:106545544..106545844 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:108087865..108088165 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:106649518..106649818 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:104603558..104603858 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:99918258..99918558 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:104858355..104858655 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:102220338..102220638 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:110794993..110795293 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017652.1chromosomeCM017652.1:2645089..2645382 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:102726752..102727052 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:108422034..108422334 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:2964766..2965066 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr04chromosomeChr04:2927406..2927706 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_02chromosomeB_02:82092001..82092296 +Gossypium anomalum (B1) genome NSF_v1n/a
chr12chromosomechr12:2586585..2586878 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_12chromosomeChr_12:1971783..1972075 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr12chromosomeChr12:2495082..2495375 -Gossypium lobatum (D7) genome ISU_v1n/a
A05chromosomeNAU_RAD_A05_60392163:1..301 .
A05:89545522..89545822 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch05_At.05N/A1.18A05_60392163View
Sequence
>NAU_RAD_A05_60392163 ID=NAU_RAD_A05_60392163; Name=NAU_RAD_A05_60392163; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
TTATTTTCTTTTTGTGTTTTCTCGAATTCTCTTATTTTCCCCTCTTTTTC
TTTTGATTTTTCTCACTTTCTTTTATTTTTATTTTCCCACTTTCTTCCTT
CAAACGTACTTGGTCTTCATACACTTGTTTGGGAGTTATAGGAACAAGTG
TGATGGGTTTCCTGTTAAACTTTAAGGAGTAGTGATTGGTGAAACCATCG
TGATTAACTCTCCGATTGTATTGCCATAGACGTCCGAGTAGGATGTGCCC
CGCATGTACGAGAACAACATCACATAACATATCATCATTGTACCATTTGA
T