NAU_RAD_A05_60198368, NAU_RAD_A05_60198368 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A05_60198368
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A05chromosomeA05:97651348..97651648 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018206.1chromosomeCM018206.1:99580218..99580519 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr04_CRI-A2_v1.0.a1chromosomeChr04_CRI-A2_v1.0.a1:95512856..95513157 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
CM016617.1chromosomeCM016617.1:3486312..3486612 -Gossypium australe (G2) genome CRI_v1.1n/a
A05chromosomeA05:89351727..89352027 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A05chromosomeGhir_A05:106351613..106351913 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A05chromosomeA05:107902396..107902696 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:106455498..106455798 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:104409390..104409690 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A05chromosomeGbar_A05:99677169..99677470 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A05chromosomeA05:104570539..104570840 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017614.1chromosomeCM017614.1:102011379..102011680 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:110519309..110519610 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017692.1chromosomeCM017692.1:102525531..102525832 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A05chromosomeA05:108227871..108228171 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr04chromosomeChr04:3259888..3260189 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr04chromosomeChr04:3129872..3130173 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
F04chromosomeF04:2775784..2776084 -Gossypium longicalyx (F1) genome NSF_v1n/a
Chr04chromosomeChr04:3240829..3241129 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
A05chromosomeNAU_RAD_A05_60198368:1..301 .
A05:89351727..89352027 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch05_At.05N/A0.87A05_60198368View
Sequence
>NAU_RAD_A05_60198368 ID=NAU_RAD_A05_60198368; Name=NAU_RAD_A05_60198368; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
TTGCAGCACAAGTCACTGGCCCTTGAAAGTCTTCCAATCAAGAATTCTCC
AGGAGCATATACTGGTGATGGTAGGCAAGGCCAGTTCAATTATAGCAAGG
GCAGAGATTTTTCAGGAGGTAAAGTGAATAAACTTTATCAAATACTTAGC
TTCTAAAATTTCTTACATGATGAACTGATATTAATAGGAAATACCATCCT
GCAAGTGATAAGCTGCATCTAAAAGTTGTTACACTTTGTTACCTGATTCA
GTTGTGACAGATGCGGCTATGTTTAATTTTTGAATATTTTCTATAAAAAA
T