NAU_RAD_A03_17535929, NAU_RAD_A03_17535929 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A03_17535929
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:36312054..36312354 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
A03chromosomeA03:17493324..17493624 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018217.1chromosomeCM018217.1:36912656..36912956 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018204.1chromosomeCM018204.1:17161432..17161730 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_02chromosomeD5_02:30872851..30873151 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:94410898..94411198 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_02chromosomeD10_02:35381294..35381594 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr3chromosomeDt_chr3:15160567..15160867 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D03chromosomeD03:30442137..30442437 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A03chromosomeA03:16031783..16032083 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D03chromosomeGhir_D03:36358739..36359039 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A03chromosomeGhir_A03:18330219..18330517 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D03chromosomeD03:37936105..37936405 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:17543659..17543959 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D03chromosomeD03:37298479..37298779 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:18148428..18148728 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D03chromosomeD03:36724283..36724583 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A03chromosomeA03:17420421..17420721 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D03chromosomeGbar_D03:35326721..35327021 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A03chromosomeGbar_A03:17167738..17168036 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D03chromosomeD03:37908067..37908367 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
A03chromosomeA03:17134800..17135098 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017625.1chromosomeCM017625.1:36352147..36352447 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017612.1chromosomeCM017612.1:17539699..17539999 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017651.1chromosomeCM017651.1:40210012..40210312 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017638.1chromosomeCM017638.1:17992001..17992301 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017703.1chromosomeCM017703.1:37919849..37920149 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D03chromosomeD03:38372534..38372834 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A03chromosomeA03:18476810..18477110 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:22740636..22740936 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:100315675..100315975 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr02chromosomeChr02:32957732..32958032 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_04chromosomeB_04:19428368..19428668 -Gossypium anomalum (B1) genome NSF_v1n/a
chr03chromosomechr03:21871279..21871748 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_03chromosomeChr_03:18699288..18699588 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr03chromosomeChr03:36280116..36280416 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr03chromosomeChr03:19078838..19079138 +Gossypium aridum (D4) genome ISU_v1n/a
Chr03chromosomeChr03:16254424..16254724 +Gossypium gossypioides (D6) genome ISU_v1n/a
Chr03chromosomeChr03:20270937..20271237 +Gossypium lobatum (D7) genome ISU_v1n/a
E02chromosomeE02:64422555..64422858 +Gossypium stocksii (E1) genome NSF_v1n/a
Chr02chromosomeChr02:37732793..37733093 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
D03chromosomeNAU_RAD_A03_17535929:1..301 .
D03:30442137..30442437 +		n/a
A03chromosomeNAU_RAD_A03_17535929:1..301 .
A03:16031783..16032083 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch03_At.03N/A3.47A03_17535929View
Sequence
>NAU_RAD_A03_17535929 ID=NAU_RAD_A03_17535929; Name=NAU_RAD_A03_17535929; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
TAGTGTGGCTTACCTCAATCATGAGTAAGTGATTGACTATGTGTGTGTAC
CTCATATACTTTAGTGTATTAAAAGTCTAAGTTCAAATAACTAAAGAGTC
GAAAGTTGGTAAGTTGGGTATAAGACTGTTTCATGGCAGTGCTTTATTGA
CAATAGTGGAATTCACAACCTAATAAAGGGTAAATGATATCAACTCATTG
GCATTATAGGATGGATGGAAGGTAACGTGGTCATGGGTTATTTGTTTAGG
ACAAATGATTTAATTATAATTTATTAATAATTGACTTTTTAATGAAGGAA
G