NAU_RAD_A03_17048990, NAU_RAD_A03_17048990 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A03_17048990
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D03chromosomeD03:36047735..36048035 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
A03chromosomeA03:16987304..16987604 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018217.1chromosomeCM018217.1:36650310..36650611 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018204.1chromosomeCM018204.1:16693290..16693590 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:94935722..94936022 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_02chromosomeD10_02:35129515..35129816 +Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016615.1chromosomeCM016615.1:82092214..82092515 +Gossypium australe (G2) genome CRI_v1.1n/a
At_chr5chromosomeAt_chr5:10178024..10178324 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Dt_chr3chromosomeDt_chr3:15424137..15424437 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D03chromosomeD03:30177270..30177570 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A03chromosomeA03:15544844..15545144 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D03chromosomeGhir_D03:36094595..36094895 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A03chromosomeGhir_A03:17843208..17843508 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D03chromosomeD03:37672712..37673012 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:17089770..17090070 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D03chromosomeD03:37034184..37034484 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:17664596..17664896 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D03chromosomeD03:36459971..36460271 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A03chromosomeA03:16938573..16938873 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D03chromosomeGbar_D03:35064391..35064692 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A03chromosomeGbar_A03:16699680..16699980 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D03chromosomeD03:37645785..37646086 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
A03chromosomeA03:16656919..16657219 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017625.1chromosomeCM017625.1:36080013..36080314 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017612.1chromosomeCM017612.1:17078914..17079214 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:17516229..17516529 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017703.1chromosomeCM017703.1:37656730..37657031 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017690.1chromosomeCM017690.1:16881004..16881304 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D03chromosomeD03:38108212..38108512 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A03chromosomeA03:17991752..17992052 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr02chromosomeChr02:16993081..16993381 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:100833167..100833467 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_04chromosomeB_04:19918174..19918475 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr03chromosomeChr03:34215764..34216065 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr03chromosomechr03:21698403..21699155 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_03chromosomeChr_03:18551002..18551303 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr03chromosomeChr03:36060347..36060649 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr03chromosomeChr03:16141011..16141312 +Gossypium gossypioides (D6) genome ISU_v1n/a
E02chromosomeE02:63942775..63943076 +Gossypium stocksii (E1) genome NSF_v1n/a
Chr02chromosomeChr02:38377886..38378187 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
D03chromosomeNAU_RAD_A03_17048990:1..301 .
D03:30177270..30177570 +		n/a
A03chromosomeNAU_RAD_A03_17048990:1..301 .
A03:15544844..15545144 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch03_At.03N/A12.53A03_17048990View
Sequence
>NAU_RAD_A03_17048990 ID=NAU_RAD_A03_17048990; Name=NAU_RAD_A03_17048990; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
AAATTCTCAGCTCCCTCCATGATCAACTCATTAGATTTGTTAGTCATATT
GCATCTTTCCTTTGTAAAATCATCAACATATCTTGATCACAAAGTTAACT
TATGTTGATCAAGTTAGCTTTTAAACCTTCAACTAGAAACAAATATTTGG
AGCTCTAATGTACCTTTTACATTAAGCACGCCCTTACCAAGAATTCCTCA
TTTTATTTCCATCAAGAAAGGTCGCCCAACTTTATGGTTTTCTTGGAATT
CTTGTAGGTAACTTTAAATTCCAATAATATCCTCCGAACATACTCTATCA
A