NAU_RAD_A01_71667456, NAU_RAD_A01_71667456 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A01_71667456
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A01chromosomeA01:89224538..89224838 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018202.1chromosomeCM018202.1:98326761..98327061 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018214.1chromosomeCM018214.1:37385863..37386164 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr02_CRI-A2_v1.0.a1chromosomeChr02_CRI-A2_v1.0.a1:84074278..84074578 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:56724749..56725049 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold71900supercontigscaffold71900:122..421 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
scaffold2511_A10supercontigscaffold2511_A10:12156..12455 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A01chromosomeA01:85320285..85320585 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:102788113..102788413 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:103487562..103487862 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:100937386..100937686 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:97920992..97921292 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:100798634..100798934 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A13chromosomeGbar_A13:37780969..37781270 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:100982402..100982702 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
A13chromosomeA13:40219285..40219586 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:99548793..99549093 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:107082502..107082802 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:97181078..97181378 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017700.1chromosomeCM017700.1:38997505..38997806 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:104385304..104385604 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:49904793..49905105 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:108311069..108311356 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:76801759..76802059 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr02chromosomeChr02:15670517..15670817 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
scaffold71900supercontigNAU_RAD_A01_71667456:1..301 .
scaffold71900:122..421 +		n/a
scaffold2511_A10supercontigNAU_RAD_A01_71667456:1..301 .
scaffold2511_A10:12156..12455 +		n/a
A01chromosomeNAU_RAD_A01_71667456:1..301 .
A01:85320285..85320585 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch01_At.01N/A66.11A01_71667456View
Sequence
>NAU_RAD_A01_71667456 ID=NAU_RAD_A01_71667456; Name=NAU_RAD_A01_71667456; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
GAGAATTCTAAGAAAATTTCTAGGGCTGAGCCTTACACGCCCGTGTGGAG
GAAATGCACATGCCCCTGTTCTTTGGGACACGCCTGTGTCCCTTACCCGT
CTGGGATTTCTAAAACTTATTTTTCATTTCAAACCTACAGAGGTTTTCAC
AAGGCCGAGCACACGCCCGTGTCCTTAGCCCGTGTCCCTTACATAGCCTA
GACACGCCCGTGTCCAAAAACCTAGACATTCTGTTTATTACGTCATCACT
TATTTAAGGGCACACGGCCATGCACACGCCCGCGTTCTAGGCCGTGTCCT
T