NAU_RAD_A01_35608580, NAU_RAD_A01_35608580 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A01_35608580
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A01chromosomeA01:42431178..42431478 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018202.1chromosomeCM018202.1:38491024..38491324 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr05_CRI-A2_v1.0.a1chromosomeChr05_CRI-A2_v1.0.a1:67501162..67501514 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:31483940..31484239 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
CM016625.1chromosomeCM016625.1:116696093..116696446 +Gossypium australe (G2) genome CRI_v1.1n/a
At_chr2chromosomeAt_chr2:40092772..40093072 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:40368060..40368360 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A13chromosomeGhir_A13:75596349..75596620 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A10chromosomeGhir_A10:15101693..15101965 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A01chromosomeGhir_A01:40859736..40860036 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
scaffold16154_obj_A01supercontigscaffold16154_obj_A01:3067..3367 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:40521799..40522099 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:40195072..40195372 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A13chromosomeGbar_A13:77564214..77564485 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A10chromosomeGbar_A10:15202478..15202750 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A07chromosomeGbar_A07:73254242..73254512 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:38804205..38804505 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:38781917..38782217 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:40722810..40723110 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017648.1chromosomeCM017648.1:81808615..81808967 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:42163412..42163712 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
A01chromosomeA01:41581171..41581471 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:58493170..58493470 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:32262813..32263112 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
A01chromosomeNAU_RAD_A01_35608580:1..301 .
A01:40368060..40368360 -		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch01_At.01N/A48.61A01_35608580View
Sequence
>NAU_RAD_A01_35608580 ID=NAU_RAD_A01_35608580; Name=NAU_RAD_A01_35608580; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
AACTCATCTCGAGAATAGATTAGAATGTCATCAATAAACACAACAAAAAA
TATGTCTAAATACGGTCTAAATATCTGCTTCATCAAATCCAAAAAAATGG
CAGGAGCATTAGTTAATCCAAAAGGCATAACAAGGAATTCATAATGTCTG
TACCTCGTTCTGAATGTTGTCTTCAGCACATCAGCATCTTTAACTCGCAA
CTGATAATAACTAGATCTTAAATGAATATTTGAAAACACTGTTGCACCTT
TCAACTGATCAAAACACTGTTACACCTTTCAACTGATCAAACAAATCGTC
T