NAU_RAD_A01_72270644, NAU_RAD_A01_72270644 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A01_72270644
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A01chromosomeA01:89817766..89818066 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018202.1chromosomeCM018202.1:98928752..98929051 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
tig00014573_CRI-A2_v1.0.a1chromosometig00014573_CRI-A2_v1.0.a1:47860..48154 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Chr02_CRI-A2_v1.0.a1chromosomeChr02_CRI-A2_v1.0.a1:84757568..84757864 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr2chromosomeAt_chr2:50449564..50449864 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A01chromosomeA01:85923473..85923773 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:103426872..103427172 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:104086708..104087008 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:101550793..101551093 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:98534968..98535268 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Scaffold2723supercontigScaffold2723:2123..2787 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:101398848..101399147 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:96389922..96390216 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:101577418..101577717 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:100147982..100148282 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017615.1chromosomeCM017615.1:41981230..41981525 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017641.1chromosomeCM017641.1:43704173..43704468 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:104618264..104618564 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:104651420..104651720 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:97769728..97770027 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:104999215..104999515 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:108916463..108916763 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr06chromosomeChr06:44891563..44891858 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr08chromosomeChr08:72324211..72324505 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr02chromosomeChr02:14950971..14951268 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
chr05chromosomechr05:36088360..36088658 +Gossypium armourianum (D2-1) genome ISU_v1n/a
A01chromosomeNAU_RAD_A01_72270644:1..301 .
A01:85923473..85923773 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch01_At.01N/A69.23A01_72270644View
Sequence
>NAU_RAD_A01_72270644 ID=NAU_RAD_A01_72270644; Name=NAU_RAD_A01_72270644; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
GACTTTAGAAACATTTTTCGGAGGTTTACAATCAAGTATAGCTGAAATTT
TACTCAGGTCAACCCAAGTACCCGATACTGATACAACATGTCCTAGAAAA
TTGACTTCACGTAACCAGAACTCGCATTTACTAAACTTCACATGCAACTA
TTTATCTTGCAAAGTTTGTAACACAAGTCTTAAATGTTCGGCATGTTCGA
ATTCACCATGGGAATAGATCAATATGTCATCTATGAAAACCACCACAAAT
CGATCTAGATACTATCTGAAGATCTGGTTCATCAAATCCATAAAAGCAGT
A