MUSB0870, MUSB0870 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0870
Genbank IDDX535114
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX535114
Source TypeEST
Repeat Motif(TTTAT)4
PCR ConditionAnnealing temperature: 50
Primer 1MUSB0870_F: TCTCCTCTGCCCGTGGTT
Primer 2MUSB0870_R: CCCTAGCAGGGCATCCTC
Product Length262
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0870
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX535114
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold8445supercontigscaffold8445:269692..270114 +
scaffold5565supercontigscaffold5565:357661..357936 +
scaffold25188supercontigscaffold25188:81..242 -
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX535114DX535114Gossypium hirsutumsequence_feature


Sequence
>MUSB0870 ID=MUSB0870; Name=MUSB0870; organism=Gossypium hirsutum; type=genetic_marker; length=262bp
TCTCCTCTGCCCGTGGTTTTTTTCCCGAAAGGGTTTCTACGTGAAATTTG
TGTGTTCTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTTCACAA
ATTGGTATCAGAGCTTCCAGGCTATTCATCTCGATCATGGTAATGGCCGT
CTTTGAAGATGAAAATTCCCGCTGTTAGATTGCAACCCAGNATTTGCGTT
GTGGCAAATTAAGATGCAAGCAGTTCTTGTACAGATGGGATCTGGAGGAT
GCCCTGCTAGGG