MUSB0735, MUSB0735 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0735
Genbank IDDX823020
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX823020.2
Source TypeEST
Repeat Motif(TA)5
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0735_F: GCAATTACGCTCCTGCTTTT
Primer 2MUSB0735_R: GTGTCGCAACACAATGTGAC
Product Length537
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0735
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX823020
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX823020.2DX823020.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch24_Dt.08N/A9.3MUSB0735View
2Yumian-1 x 7235, RIL (2015)AD_ch15_Dt.01N/A96.3MUSB0735bView
3Yumian-1 x 7235, RIL (2015)AD_ch24_Dt.08N/A53MUSB0735aView
Sequence
>MUSB0735 ID=MUSB0735; Name=MUSB0735; organism=Gossypium hirsutum; type=genetic_marker; length=537bp
GCAATTACGCTCCTGCTTTTATTAAAAATTAGAAAAAAAATTATAAAAAA
TTAAAATCAATAAAACATATAAATATTATTTAAATTTTAATAAAAAATTA
AAATATTAAAAATTTAATAAAATTTATAAAATAATAGAAAAATCGTAAAA
ATATATATAAAAATTATAAAATTTTATAAAAATCGTAAAAAAATTTATAA
AATATAAAATTCTATAAAGTCATAGAAAAATTATAAAATGCTTCTTTTGG
TATGATAATTTTTATAAAATTTATATTTCTTTACATTTTATATGATTTTC
TTACGACTTTATAAAATTGTATAATTTTTTTATATTTCTATTTATTTTAT
AATTTTTTATGATTTTTATAAAATTTTATAATTTTTTATATATATAAACT
GTAAAGAAATATAATTTTCGTAAAAAAAATTTATAAAATTTATTATACCA
AAAGAAGTATTTTATAATTTTTTTATAACTTTTATTGATTTTTATTTTTC
ATCATTTTTCACCACATGTCACATTGTGTTGCGACAC