MUSB0422, MUSB0422 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0422
Genbank IDDX822740
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822740
Source TypeEST
Repeat Motif(TAA)4
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0422_F: AGTTGGAGAGGAGGGGTTTG
Primer 2MUSB0422_R: TACATGAGGGCCAATGAGTG
Product Length400
Restriction EnzymeHindIII; NotI
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822740
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822740DX822740Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch08_At.08N/A11musb0422View
2TM-1 x 3-79, RIL (2006)AD_ch08_At.08N/A85.4musb0422View
3TM-1 x 3-79, RIL (2011)AD_ch08_At.08N/A22MUSB0422_330View
Sequence
>MUSB0422 ID=MUSB0422; Name=MUSB0422; organism=Gossypium hirsutum; type=genetic_marker; length=400bp
AGTTGGAGAGGAGGGGTTTGGTAGGGATCAGTTTCTTTAAAATGAAAATT
TTTATTTAGACTCTTTTATAGTTTATAAAATTTTAAATTAATAATAATAA
AATTATACTTCGGTCCAAAAAATAATAAAATTTTAATTTAATTCTTTAAA
AATTATAAAGATATAATATATTAAAATAATAAAATAATAAAATAATATCT
TTATTATCATAAAAATACATAATTTAATTTTTATCCAAAAATAATTCTAA
CTATTTGCTTATAATTTATTGAGAAGTATGTACTGTGTATTGGTGTTTTT
GTAGCTATAGAAAAATGATATTTTCCTAAATTTCAGCTACATTGCGATAG
CTTTTTAGATGTCCCATGAATGTAAGGAACCACTCATTGGCCCTCATGTA