MUSB0040, MUSB0040 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0040
Genbank IDDX535172
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX535172
Source TypeEST
Repeat Motif(TA)6
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0040_F: TCACCTTACTGCTGCTGTCC
Primer 2MUSB0040_R: TGGGGTATAATGTGGATTGG
Product Length296
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0040
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX535172
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX535172DX535172Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, RIL (2006)AD_ch08_At.08N/A23.4MUSB0040View
2Yumian-1 x T586, RIL (2009)AD_ch08_At.08N/A18.6MUSB0040/300yView
Sequence
>MUSB0040 ID=MUSB0040; Name=MUSB0040; organism=Gossypium hirsutum; type=genetic_marker; length=296bp
TCACCTTACTGCTGCTGTCCCCCAACAGATTATCACCAAATCAAATACTA
ACATTAGCATTTCACCTTAATAGCTAGCTTACCAAGCCTTGATTTAACAT
ATAATTCACACATATCACATTCAGCTATATATATATACATTTATCATATT
TATTATTAANCAAGTATGCTCATGACAAATTTACTCCCAATCGCATCTCN
AAAATCATCAAGCTTAGAACACATTTACTAAATAAATCCGGGAGTTAATC
ACTTTGCTACCANCTATACATATAATCCAATCCACATTATACCCCA