CIR0370, CIR0370 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0370
AliasCIR370
Genbank IDAJ567300
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567300
Source Typegenomic
Repeat Motif(AC)10
PCR ConditionAnnealing temperature: 51
Primer 1CIR370_F: CTTTTCCCCTTTACACC
Primer 2CIR370_R: GGACATTGGCATTCATA
Product Length205
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567300
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567300AJ567300Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
17235 x TM-1, RIL (2007)AD_ch15_Dt.01N/A41.2CIR370aView
27235 x TM-1, RIL (2007)AD_ch24_Dt.08N/A46.5CIR370bView
3Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch24_Dt.08N/A119.1CIR370View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch24_Dt.08N/A84.31CIR370View
5AD-genome wide Reference Map (2009)AD_ch15_Dt.01N/A143cir0370View
6AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A90cir0370View
Sequence
>CIR0370 ID=CIR0370; Name=CIR0370; organism=Gossypium hirsutum; type=genetic_marker; length=205bp
CTTTTCCCCTTTACACCATCCTTCCTAAACTACTTGGCTCCAAAATTGAA
CACGTGTTCCAACTCAACTAATATGCGCATACACACACACACACACACAC
ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATTGCAAG
ACATTTACAAACTGTACGACTTNGAGGCACAAGTCGGCTATGAATGCCAA
TGTCC