CIR0335, CIR0335 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0335
AliasCIR335
Genbank IDAJ567272
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567272
Source Typegenomic
Repeat Motif(AC)13
PCR ConditionAnnealing temperature: 51
Primer 1CIR335_F: TACCAAAACAAAGAGTAACC
Primer 2CIR335_R: AGCACCAAGCAAAATC
Product Length177
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567272
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567272AJ567272Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch07_At.07N/A121.9CIR335View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch07_At.07N/A55.18CIR335View
3AD-genome wide Reference Map (2009)AD_ch07_At.07N/A124cir0335View
Sequence
>CIR0335 ID=CIR0335; Name=CIR0335; organism=Gossypium hirsutum; type=genetic_marker; length=177bp
TACCAAAACAAAGAGTAACCAAAGCGCGCGCGCGCACACACACACACACA
CACACACACACAAAAAAAAGGAAGTGACCTGTGGGATTGGATATATGGGA
AATGGAGAGGGGAGCNAGAGAAAAAGGAAGAGTCAAAGCTTGGAAACCGA
CCATCGGTTTGGATTTTGCTTGGTGCT