CIR0223, CIR0223 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0223
AliasCIR223
Genbank IDAJ567169
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567169
Source Typegenomic
Repeat Motif(TG)10
PCR ConditionAnnealing temperature: 55
Primer 1CIR223_F: AGAAACATCTGCAAACCT
Primer 2CIR223_R: ATCTCTCTAATCCTTGCTTC
Product Length264
PolymorphismP_ CIR0223
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567169
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567169AJ567169Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, RIL (2009)AD_ch04_At.04N/A69.74CIR223View
2Emian-22 x 3-79, BC1 (2011)AD_ch04_At.04N/A140.78CIR223View
3Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch04_At.04N/A190.5CIR223View
4Emian-22 x 3-79, BC1 (2012)AD_ch04_At.04N/A160CIR223View
5AD-genome wide Reference Map (2009)AD_ch04_At.04N/A156cir0223View
Sequence
>CIR0223 ID=CIR0223; Name=CIR0223; organism=Gossypium hirsutum; type=genetic_marker; length=264bp
AGAAACATCTGCAAACCTTTTCTCACCGAGAGAAAAAAAAGGCGCTTTCT
TTCTTTCTAACATTACACCTTTCATGACTATAGACATATATGTGTGTGTG
TGTGTGTGTGCTGCTCTCAAGACTTTTCGTTCAATAGTTCTTGTTTGTTT
TCAATGCGTCATGGTTCAGATGCCAGATATTTTGAACTGGTTTGGCTGGT
GTACATGGGATGCTTTTCTATACTAATGTCTCTGCTGAGGGCCTGAAGCA
AGGATTAGAGAGAT