CIR0104, CIR0104 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0104
AliasCIR104
Genbank IDAJ567053
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567053
Source Typegenomic
Repeat Motif(AC)7
PCR ConditionAnnealing temperature: 55
Primer 1CIR104_F: GAGAGCATTTGATTCCTT
Primer 2CIR104_R: GAACTGCTAACACCACCT
Product Length149
PolymorphismP_ CIR0104
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567053
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567053AJ567053Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch10_At.10N/A101.6CIR104View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch10_At.10N/A91.01CIR104View
3AD-genome wide Reference Map (2009)AD_ch10_At.10N/A157cir0104View
Sequence
>CIR0104 ID=CIR0104; Name=CIR0104; organism=Gossypium hirsutum; type=genetic_marker; length=149bp
GAGAGCATTTGATTCCTTGGCAGAGAGGTGTAGGCTTAATTAATTTTTCT
CCTTTTTTCTTTGAACATCTTGGAACACACACACACACATTCGCATTTAT
GCACAATTGGGTGTATGAGAATTTTAATGGCAGGTGGTGTTAGCAGTTC