CIR0027, CIR0027 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0027
AliasCIR27
CIR027
Genbank IDAJ566976
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ566976
Source Typegenomic
Repeat Motif(TG)7
PCR ConditionAnnealing temperature: 49
Primer 1CIR027_F: CGTTAGAATACCAAGCTG
Primer 2CIR027_R: AGGAGGATTTGTTAAAGG
Product Length157
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ566976
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ566976AJ566976Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch13_At.13N/A147CIR027aView
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch04_At.04N/A152.1CIR027bView
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch13_At.13N/A86.93CIR027View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch04_At.04N/A92.12CIR027View
5AD-genome wide Reference Map (2009)AD_ch04_At.04N/A148cir0027View
6AD-genome wide Reference Map (2009)AD_ch13_At.13N/A188cir0027View
Sequence
>CIR0027 ID=CIR0027; Name=CIR0027; organism=Gossypium hirsutum; type=genetic_marker; length=157bp
CGTTAGAATACCAAGCTGAATAAAATAGTCTTGTGTGTGTGTGTGTTTTA
CGGCAAATTGATAGTTTATAGCTTCACAGCTTGTAGTAATCTATAGGAGG
CTTGGAATCAAGTGAGCTTGCAAAAACTTGGCAAAAATTCCTTTAACAAA
TCCTCCT