CIR0016, CIR0016 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0016
AliasCIR16
CIR016
Genbank IDAJ566965
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ566965
Source Typegenomic
Repeat Motif(T)9(TG)8
PCR ConditionAnnealing temperature: 51
Primer 1CIR016_F: CCATACATCACAACTGAAA
Primer 2CIR016_R: CCCAACTTGTCATCTCTAC
Product Length298
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ566965
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ566965AJ566965Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch10_At.10N/A55.23CIR016View
2TM-1 x 3-79, RIL (2014)AD_ch10_At.10N/A59CIR016View
3TM-1 x 3-79, RIL (2012.v3)AD_ch10_At.10N/A59CIR016View
Sequence
>CIR0016 ID=CIR0016; Name=CIR0016; organism=Gossypium hirsutum; type=genetic_marker; length=298bp
CCATACATCACAACTGAAAAGAGAAAGAAAAGGAGTCCATGACTCAACAA
CTTTGAATAAATCAAACAAATAAATATCCCTAAAGAAACGTGATTTATTA
TCCAAACAACCTAAAACAGATTATCAAATCCTAACAAAAGTTAAATATTT
AATCTATGTTTTCCAATTGAATCTTTTTAGTCGCTATCTTTTTTGATTTC
CAAATTTTACTCTTAATGTAAATAACACTCGTTAAATCTATTAACTAGTT
TTTTTTTGTGTGTGTGTGTGTGGTAATAAGTAGAGATGACAAGTTGGG